Aligning the Alliance of Genome Resources with FAIR and TRUST principles
Aligning the Alliance of Genome Resources with FAIR and TRUST principles
批准号:
10407901
负责人:
CAROL J BULT
金额:
$19.39万
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-09-18 至 2024-07-31
关键词:
AddressAdministrative SupplementAnimal ModelAreaBiomedical ResearchCertificationCommunitiesComputer softwareDataData ScienceDevelopmentEcosystemEducational workshopEnsureFAIR principlesFoundationsFundingGenesGoalsHuman BiologyInfrastructureKnowledgeLicensingMaintenanceMissionModernizationOntologyOrganismOutcomeResourcesTRUST principlesTrustUnited States National Institutes of HealthUpdateWorkdata ecosystemdata formatdata harmonizationdata managementdata repositorydata resourcedata submissiongenome resourcegenomic datahuman diseaseimprovedinterestmeetingsmodel organisms databasesresponsesealtrendweb site
中文摘要
项目总结
基因组资源联盟(The Alliance of Genome Resources,简称联盟)是一个专门管理基因组的“知识共享空间”
由模式生物数据库(MODS)和基因本体论联盟(GOC)提供的数据和注释。我们的
任务是促进使用模型生物来了解人类生物学和疾病。联盟是
组织为两个相互关联的职能单位:联盟中心和联盟知识中心。联盟
中央负责软件平台和共享模块的开发和维护
这些资源将用于基础设施建设和协调各知识中心的数据统一活动。联盟
知识中心,如国防部和GOC,负责专家管理和提交
使用通用数据格式将数据发送到联盟中心。知识中心还负责有机体-
特定的用户支持活动、资源和对Alliance Central尚不支持的数据的用户访问。这个
联盟的数据管理原则与公平原则所代表的原则非常一致
(可发现性、可访问性、互操作性、可重用性)和信任中反映的操作方法
原则(透明度、责任、以用户为中心、可持续性和技术)。本届奥运会的重点是
响应NOT-OD-21-089的行政补充文件包括以下目标:(1)处理以下领域
FAIRShake评估中记录的基因组资源联盟(Alliance)的改进
在NIH共同基金数据生态系统项目的主持下进行,(2)完成联盟的
申请获得核心信任印章认证,以及(3)更新数据和注释信息
(可重复使用)数据项目(RDP)上托管的联盟的许可条款。我们还将参加
NOT-OD-21-089中描述的研讨会和会议,使联盟能够比较
我们用来评估我们的资源对其他相关数据资源的影响的指标/指标
根据需要调整我们的指标,以符合新的社区标准或趋势。这次会议的结果
建议的工作与NOT-OD-21-089的意图保持一致,以增加社区数据的合规性
具有公平和信任原则的资源,这些原则是为
生物医学研究社区。
英文摘要
PROJECT SUMMARY
The Alliance of Genome Resources (the Alliance) is a “knowledge commons” for expertly curated genomic
data and annotations by model organism databases (MODs) and the Gene Ontology Consortium (GOC). Our
mission is to facilitate the use of model organisms to understand human biology and disease. The Alliance is
organized as two interconnected functional units: Alliance Central and Alliance Knowledge Centers. Alliance
Central is responsible for development and maintenance of the software platform and shared modular
infrastructure and for the coordination of data harmonization activities across the Knowledge Centers. Alliance
Knowledge Centers such as the MODs and the GOC are responsible for expert curation and for submission of
data to Alliance Central using common data formats. Knowledge Centers also are responsible for organism-
specific user support activities, resources, and user access to data not yet supported by Alliance Central. The
data management principles of the Alliance align well with the principles represented by FAIR principles
(Findability, Accessibility, Interoperability, Reusability) and operational approaches reflected in the TRUST
principles (Transparency, Responsibility, User focus, Sustainability and Technology). The focus for the
administrative supplement in response to NOT-OD-21-089, includes the following aims: (1) address areas of
improvement documented for the Alliance of Genome Resources (Alliance) in a FAIRShake assessment
conducted under the auspices of the NIH Common Fund Data Ecosystem Project, (2) complete the Alliance's
application to obtain Core Trust Seal certification, and (3) update information about the data and annotation
licensing terms at the Alliance hosted on the (Re)usable Data Project (RDP). We will also participate in the
workshops and meetings described in NOT-OD-21-089 which will allow the Alliance to compare the
metrics/indicators we use to evaluate the impact of our resource to those of other relevant data resources and
to adapt our metrics as needed to conform to new community standards or trends. The outcomes of the
proposed work align well with the intent of NOT-OD-21-089 to increase the compliance of community data
resources with FAIR and TRUST principles that are foundational to a modern data science ecosystem for the
biomedical research community.
期刊论文(0)
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科研奖励(0)
会议论文
JAX Diversity Action Plan (DAP) Post-Baccalaureate Program in Genomics (gDAP)
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批准号:10555588
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Pediatric Oncology In Vivo Testing Program Coordinating Center
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批准号:10700004
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项目类别:
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资助金额:$84.72万
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财政年份:2021
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负责人:CAROL J BULT
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依托单位:
Pediatric Oncology In Vivo Testing Program Coordinating Center
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批准号:10474488
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批准号:10613271
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批准号:10831681
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财政年份:2019
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负责人:CAROL J BULT
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依托单位:
Alliance Central: A platform for sustainable development of next generation genome knowledgebases
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批准号:10020426
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项目类别:
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资助金额:$500.0万
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财政年份:2019
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依托单位:
Alliance Central: A platform for sustainable development of next generation genome knowledgebases
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批准号:10470142
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依托单位:
Model organism neural circuit knowledge graph
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批准号:10412857
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项目类别:
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资助金额:$25.95万
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财政年份:2019
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负责人:CAROL J BULT
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依托单位:
Alliance Central: A platform for sustainable development of next generation genome knowledgebases
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批准号:10683183
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项目类别:
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资助金额:$499.5万
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财政年份:2019
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依托单位:
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批准号:8582266
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财政年份:2013
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负责人:CAROL J BULT
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依托单位:
Diversity Action Plan for Mouse Genome Database
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批准号:9895840
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项目类别:
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资助金额:$2.78万
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财政年份:2013
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负责人:CAROL J BULT
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依托单位:
Diversity Action Plan for Mouse Genome Database
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批准号:9073995
-
项目类别:
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资助金额:$7.74万
-
财政年份:2013
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负责人:CAROL J BULT
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依托单位:
Metabolite Profiling of a Novel Mitochondrial Kinase in Neuromuscular Disease
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批准号:8658494
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项目类别:
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资助金额:$21.66万
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财政年份:2013
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负责人:CAROL J BULT
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依托单位:
Gene Mutation and Rescue in Human Diaphragmatic Hernia
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批准号:9403605
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资助金额:$175.94万
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财政年份:2011
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负责人:CAROL J BULT
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依托单位:
Gene Mutation and Rescue in Human Diaphragmatic Hernia
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批准号:10159737
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项目类别:
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资助金额:$163.07万
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财政年份:2011
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负责人:CAROL J BULT
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依托单位:
COMPUTATIONAL SCIENCE
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批准号:7535423
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资助金额:$28.43万
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负责人:CAROL J BULT
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依托单位:
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依托单位:
MouseCyc: A Biochemical Pathway Database for the Mouse
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批准号:7215571
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资助金额:$24.47万
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财政年份:2006
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负责人:CAROL J BULT
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依托单位:
MouseCyc: A Biochemical Pathway Database for the Mouse
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批准号:7033357
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项目类别:
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资助金额:$25.2万
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财政年份:2006
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依托单位:
海外基金