Mathematics of Biological Systems: Modelling, Data & Analysis
Mathematics of Biological Systems: Modelling, Data & Analysis
批准号:
EP/C544587/1
负责人:
David Rand
金额:
$58.57万
依托单位:
依托单位国家:
英国
项目类别:
Fellowship
财政年份:
2006
资助国家:
英国
项目状态:
已结题
起止时间:
2006 至 --
中文摘要
要预测和预防癌症、糖尿病和艾滋病等疾病,我们需要做的不仅仅是确定构成细胞和组织机械的组件。我们还必须了解这些组成部分如何相互作用,以产生正常和病理性的行为。由于基因、转录物、蛋白质、代谢物和细胞之间的相互作用是复杂的和动态的,需要数学建模和分析才能理解它们。此外,有许多快速增长的强大技术来探测基因表达以及代谢物和蛋白质的丰度和空间分布。这些产生了大量的数据,需要开发新的数学和统计方法。这一问题和相关的实验设计问题提出了相当大的数学和统计学挑战。这项工作将在一些生物学领域进行,期望这些领域获得的结果可能是可推广的。这些包括生物钟、光周期、T细胞的免疫学、植物发育(开花)、细胞凋亡的控制(细胞自杀)和复制,以及细菌信号。这项研究涉及与实验小组的广泛合作,并将在数学和物理科学家以及生物学家和临床医生参与的多学科背景下进行。
英文摘要
To predict and preventing diseases such as cancer, diabetes and AIDS we need to do more than identify the components that make up the machinery of cells and tissues. We must also understand how these components interact to produce normal and pathological behaviour. Since the interactions between genes, transcripts, proteins, metabolites and cells are complex and dynamics, mathematical modelling and analysis will be needed for their understanding. Moreover, there is a rapidly growing number of powerful technologies that probe gene expression and the abundance and spatial distribution of metabolites and proteins. These produce huge amounts of data and require the development of new mathematical and statistical methods. This and the associated experimental design problems pose considerable mathematical and statistical challenges.This work will be developed in a number of biological areas chosen with the expectation that results obtained for these are likely to be generalisable. These include circadian clocks, photoperiodism, immunology of T cells, plant development (flowering), the control of apoptosis (cell suicide) and replication, and bacterial signalling. The research involves extensive collaboration with experimental groups and will be carried out in a multidisciplinary context involving mathematical and physical scientists as well as biologists and clinicians.
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DOI:
10.1093/bioinformatics/btn562
发表时间:
2008-12-15
期刊:
Bioinformatics (Oxford, England)
影响因子:
--
作者:
[Finkenstädt B, Heron EA, Komorowski M, Edwards K, Tang S, Harper CV, Davis JR, White MR, Millar AJ, Rand DA]
通讯作者:
Rand DA
Pulsatile stimulation determines timing and specificity of NF-kappaB-dependent transcription.
脉冲刺激决定了NF-kappab依赖性转录的时间和特异性。
DOI:
10.1126/science.1164860
发表时间:
2009-04-10
期刊:
Science (New York, N.Y.)
影响因子:
--
作者:
[Ashall L, Horton CA, Nelson DE, Paszek P, Harper CV, Sillitoe K, Ryan S, Spiller DG, Unitt JF, Broomhead DS, Kell DB, Rand DA, Sée V, White MR]
通讯作者:
White MR
DOI:
10.1186/s12859-016-0972-2
发表时间:
2016-03-10
期刊:
BMC bioinformatics
影响因子:
3
作者:
[Domijan M, Brown PE, Shulgin BV, Rand DA]
通讯作者:
Rand DA
Using constraints and their value for optimization of large ODE systems.
使用约束及其价值来优化大型 ODE 系统。
DOI:
10.1098/rsif.2014.1303
发表时间:
2015
期刊:
Journal of the Royal Society, Interface
影响因子:
--
作者:
[Domijan M]
通讯作者:
Domijan M
DOI:
10.1371/journal.pbio.1000607
发表时间:
2011-04
期刊:
PLoS biology
影响因子:
9.8
作者:
[Harper CV, Finkenstädt B, Woodcock DJ, Friedrichsen S, Semprini S, Ashall L, Spiller DG, Mullins JJ, Rand DA, Davis JR, White MR]
通讯作者:
White MR
共 6 条
Using catastrophes, dynamics & data analysis to uncover how differentiating cells make decisions
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批准号:EP/T031573/1
-
项目类别:Research Grant
-
资助金额:$56.87万
-
财政年份:2021
-
负责人:David Rand
-
依托单位:
Collaborative Research: From Brains to Society: Neural Underpinnings of Collective Behaviors Via Massive Data and Experiments
-
批准号:2053626
-
项目类别:Continuing Grant
-
资助金额:$39.83万
-
财政年份:2020
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负责人:David Rand
-
依托单位:
Collaborative Research: From Brains to Society: Neural Underpinnings of Collective Behaviors Via Massive Data and Experiments
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批准号:1939934
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项目类别:Continuing Grant
-
资助金额:$39.83万
-
财政年份:2019
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负责人:David Rand
-
依托单位:
Mathematical Foundations of Information and Decisions in Dynamic Cell Signalling
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批准号:EP/P019811/1
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项目类别:Research Grant
-
资助金额:$45.39万
-
财政年份:2017
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负责人:David Rand
-
依托单位:
Small Grant for Visiting Researcher Professor Marek Kimmel, Rice University
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批准号:EP/J006653/1
-
项目类别:Research Grant
-
资助金额:$3.05万
-
财政年份:2011
-
负责人:David Rand
-
依托单位:
IGERT: Reverse Ecology: Computational Integration of Genomes, Organisms, and Environments
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批准号:0966060
-
项目类别:Continuing Grant
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资助金额:$297.68万
-
财政年份:2010
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负责人:David Rand
-
依托单位:
Circadian and cell cycle clock systems in cancer
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批准号:BB/I004521/1
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项目类别:Research Grant
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资助金额:$31.44万
-
财政年份:2010
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负责人:David Rand
-
依托单位:
American Genetic Association Symposium: The Genetics and Genomics of Environmental Change
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批准号:0926150
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项目类别:Standard Grant
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资助金额:$2.5万
-
财政年份:2009
-
负责人:David Rand
-
依托单位:
Dynamics and Function of the NF-kB Signalling System
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批准号:BB/F005814/1
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项目类别:Research Grant
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资助金额:$101.02万
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财政年份:2008
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负责人:David Rand
-
依托单位:
Regulation of Biological Signalling by Temperature (ROBUST)
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批准号:BB/F005261/1
-
项目类别:Research Grant
-
资助金额:$89.71万
-
财政年份:2008
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负责人:David Rand
-
依托单位:
Dissertation Research: Functional Divergence of Cytochrome C Paralogs
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批准号:0709949
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项目类别:Standard Grant
-
资助金额:$1.2万
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财政年份:2007
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负责人:David Rand
-
依托单位:
Collaborative Research: Genetic Architecture of Thermal Selection in Drosophila
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批准号:0343464
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项目类别:Standard Grant
-
资助金额:$0.0万
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财政年份:2004
-
负责人:David Rand
-
依托单位:
Nucleotide Polymorphism in Heterogeneous Environments: Mpi in Semibalanus
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批准号:0108500
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项目类别:Standard Grant
-
资助金额:$26.2万
-
财政年份:2001
-
负责人:David Rand
-
依托单位:
Dissertation Research: From Parasitism to Mutualism: Effects of Wolbachia on Drosophila Survival and Reproduction
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批准号:0104912
-
项目类别:Standard Grant
-
资助金额:$0.58万
-
财政年份:2001
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负责人:David Rand
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依托单位:
Recombination, Dominance, and Selection on Amino Acid Mutations
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批准号:9981497
-
项目类别:Standard Grant
-
资助金额:$17.24万
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财政年份:2000
-
负责人:David Rand
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依托单位:
U.S.-France Cooperative Research: Molecular Population Genetics of Old-World and New-World Drosophila
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批准号:9981452
-
项目类别:Standard Grant
-
资助金额:$1.55万
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财政年份:2000
-
负责人:David Rand
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依托单位:
U.S.-France Cooperative Research: Molecular Population Genetics of Old World and New World Drosophila
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批准号:9815899
-
项目类别:Standard Grant
-
资助金额:$0.67万
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财政年份:1999
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负责人:David Rand
-
依托单位:
Dissertation Research: The Mechanism of Selection at the Mpi Polymorphism in Semibalanus balanoides
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批准号:9801563
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项目类别:Standard Grant
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资助金额:$0.57万
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财政年份:1998
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负责人:David Rand
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依托单位:
Evolutionary Dynamics of Mitochondrial DNA
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批准号:9707676
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项目类别:Standard Grant
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资助金额:$22.0万
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财政年份:1997
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负责人:David Rand
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依托单位:
An Automated DNA Sequencer for Brown University
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批准号:9513001
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项目类别:Standard Grant
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资助金额:$7.0万
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财政年份:1996
-
负责人:David Rand
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依托单位:
海外基金