Symposium: Tapping the Power of Crustacean Transcriptomes to Address Grand Challenges in Comparative Biology, Portland, Oregon, January 3-7, 2016

研讨会：利用甲壳动物转录组的力量应对比较生物学的巨大挑战，俄勒冈州波特兰，2016 年 1 月 3-7 日

• 批准号: 1551003
• 负责人: Donald Mykles
• 金额: $ 1.06万
• 依托单位: Society for Integrative and Comparative Biology
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-12-01 至 2016-11-30
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1551003&HistoricalAwards=false
• 关键词: Symposium; Tapping; Power; Crustacean; Transcriptomes

Transcriptomic research approaches allow investigators to comprehensively analyze the profile of messenger RNA used to produce protein in cells or tissue samples. The most popular such approach, called "RNA-seq" (for RNA-sequencing) is finding its way into all areas of comparative and integrative biology, yielding insights that are difficult or impossible to attain with the traditional protein-by-protein or gene-by-gene approach. But, there are impediments to using the technology, especially for novel or so-called "non-model" organisms. This award will support a symposium, "Tapping the Power of Crustacean Transcriptomes to Address Grand Challenges in Comparative Biology," and associated activities that will be held at the Society for Comparative & Integrative Biology (SICB) meeting in Portland, Oregon Jan. 3-7, 2016. The symposium will help researchers both identify, and move past such impediments. The symposium is co-sponsored by The Crustacean Society and five SICB Divisions. In addition, the PI and symposium organizers are Executive Committee members of the Animal Genome to Phenome Research Coordination Network (AG2P RCN). The program consists of 11 presentations representing six research areas using transcriptomics to a variety of research questions in crustacean biology. There will be a complementary session with speakers selected from submitted abstracts. The accompanying luncheon, feedback booth, Twitter feed, and workshop will further broaden participation across disciplines, gender, ethnicity, and professional rank. The activities supported by this award will include: (1) a lunch scheduled early in the meeting to introduce the AG2P RCN; (2) an RNA-seq feedback booth in the exhibition hall and Twitter feed to gather comments and identify needs from SICB members; and (3) a transcriptomics workshop to review pipelines and best practices that include responses from the feedback booth. Expected outcomes of the workshop include a policy paper on creating an interface and pipeline for the analysis of RNA-seq data, and recruitment of participants in the AG2P RCN. Conference papers planned for publication in the SICB journal, Integrative and Comparative Biology (ICB) will serve as a valuable resource for future researchers.

转录组学研究方法使研究人员能够全面分析用于在细胞或组织样本中产生蛋白质的信使RNA的概况。 最流行的这种方法，称为“RNA-seq”（用于RNA测序），正在进入比较和整合生物学的所有领域，产生传统蛋白质或基因的方法难以或不可能实现的见解。 但是，使用该技术存在障碍，特别是对于新的或所谓的“非模式”生物。 该奖项将支持一个研讨会，“挖掘甲壳类动物转录组的力量，以应对比较生物学的巨大挑战”，以及将在比较综合生物学（SICB）在波特兰，俄勒冈州1月举行的会议上举行的相关活动。研讨会将帮助研究人员识别并克服这些障碍。 研讨会由甲壳动物学会和SICB五个分部共同主办。此外，PI和研讨会组织者是动物基因组表型组研究协调网络（AG 2 P RCN）的执行委员会成员。该计划包括11个演示文稿，代表六个研究领域，使用转录组学在甲壳动物生物学的各种研究问题。将举行一次补充会议，从提交的摘要中选出发言者。 伴随的午餐会，反馈摊位，Twitter饲料和研讨会将进一步扩大跨学科，性别，种族和专业级别的参与。该奖项支持的活动将包括：（1）在会议早期安排午餐，介绍AG 2 P RCN;（2）在展厅和Twitter上设立RNA-seq反馈亭，收集SICB成员的意见并确定其需求;（3）转录组学研讨会，审查管道和最佳实践，包括反馈亭的回应。研讨会的预期成果包括一份关于为RNA-seq数据分析创建接口和管道的政策文件，以及AG 2 P RCN参与者的招募。 计划在SICB杂志上发表的会议论文，综合和比较生物学（ICB）将成为未来研究人员的宝贵资源。