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Collaborative Research: IIBR Informatics: Data integration to improve population distribution estimation with animal tracking data

Collaborative Research: IIBR Informatics: Data integration to improve population distribution estimation with animal tracking data
合作研究:IIBR 信息学:数据集成,利用动物追踪数据改进人口分布估计
批准号:
1914887
负责人:
Daniel Sheldon
金额:
$8.86万
依托单位国家:
美国
项目类别:
Standard Grant
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-08-15 至 2023-07-31

项目摘要

项目成果

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中文摘要
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英文摘要
Identifying how environmental factors affect where particular species occur is important for the preservation and maintenance of biodiversity. Specifically, this knowledge can be used to delineate species' ecological niches, provide benchmarks for measuring change, and help prioritize areas for conservation. Given this importance, ecologists have developed many statistical tools for identifying linkages between environmental factors and species occurrence patterns. Most of these tools can be sorted into two categories, based on whether they use traditional survey data, or animal tracking data. In either category, the amount and quality of available data is frequently limiting. This project aims to unify these two approaches under a single methodology that can simultaneously use both types of data. This is important because it can help overcome limitations in each data source, and because these different data types have complementary strengths, and are thus more informative in combination. Project work will focus on at-risk species including jaguars and lowland tapirs, where both data types are available, to demonstrate how these techniques can inform conservation efforts. By combining the strengths of multiple data sources, these new methods will be able to better resolve priority habitats and areas for these vulnerable species. Senior project personnel will participate in the AniMove.org animal movement analysis courses to teach students to apply these methods to conservation problems and will also host a data-integration workshop at the North Carolina Museum of Natural Science (NCMNS). Leveraging the 1 million yearly visitors that NCMNS receives, this project?s outreach efforts will focus on creating and displaying immersive videos that bring to life the entire scientific process, ranging from study design and field work, through analysis and forecasting, and on to informed conservation decision making.Tools that identify linkages between environmental drivers and species' occurrence patterns are routinely used in ecology, with species distribution models (SDMs) and resource selection functions (RSFs) being especially prominent examples. Though these approaches are closely related, SDMs tend to be employed on large scales with survey data, while RSFs are typically used for local populations and applied to animal tracking data. The ubiquitous auto-correlation within, and frequent cross-correlation among, individual tracking datasets violates the key independence assumption of standard distribution models. To unify these approaches, a novel weighted log-likelihood function will be developed to account for non-independence both within and among tracking datasets, as well as for differing sampling schedules and study duration. This weighted log -likelihood will be integrated with both presence-only and presence-absence survey data in the very general in homogeneous Poisson point process framework for distribution modeling. This approach has two primary advantages. First, it would allow accumulating stockpiles of tracking data to validly inform a broad range of distribution analyses, from RSFs at the local scale, to SDMs at the geographic range scale. Second, it will counteract the often -pronounced spatial biases in survey data by leveraging the fact that tracked animals frequently go where surveyors don? t. Compared to conventional distribution models, this novel methodology will scale seamlessly from local populations to geographic ranges, increase overall sample size, and exploit the contrasting properties of the different data types to reduce spatial bias and more accurately estimate uncertainty. To facilitate broad use of this methodology, a freely available software tool, the Distribution Data Integration Module (DDIM), will be developed to both construct the necessary multi-source datasets, and annotate these data with relevant environmental covariates. Project results will be available at http://biology.umd.edu/movement.html.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
期刊论文(3)
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会议论文
Reconstructing bird trajectories from pressure and wind data using a highly optimized hidden Markov model
使用高度优化的隐马尔可夫模型根据压力和风数据重建鸟类轨迹
DOI: 10.1111/2041-210x.14082
发表时间: 2023
期刊: Methods in Ecology and Evolution
影响因子: 6.6
作者: [Nussbaumer, Raphaël, Gravey, Mathieu, Briedis, Martins, Liechti, Felix, Sheldon, Daniel]
通讯作者: Sheldon, Daniel
BirdFlow : Learning seasonal bird movements from eBird data
BirdFlow:从 eBird 数据学习季节性鸟类运动
DOI: 10.1111/2041-210x.14052
发表时间: 2023
期刊: Methods in Ecology and Evolution
影响因子: 6.6
作者: [Fuentes, Miguel, Van Doren, Benjamin M., Fink, Daniel, Sheldon, Daniel]
通讯作者: Sheldon, Daniel
Collaborative Research: BirdFlow: Learning Bird Population Flows from Citizen Science Data
  • 批准号:
    2210979
  • 项目类别:
    Standard Grant
  • 资助金额:
    $82.7万
  • 财政年份:
    2022
  • 负责人:
    Daniel Sheldon
  • 依托单位:
Collaborative Research: MRA: Insectivore Response to Environmental Change
  • 批准号:
    2017756
  • 项目类别:
    Standard Grant
  • 资助金额:
    $34.49万
  • 财政年份:
    2020
  • 负责人:
    Daniel Sheldon
  • 依托单位:
CAREER: From Data to Knowledge and Decisions for Global-Scale Ecological Sustainability
  • 批准号:
    1749854
  • 项目类别:
    Continuing Grant
  • 资助金额:
    $55.0万
  • 财政年份:
    2018
  • 负责人:
    Daniel Sheldon
  • 依托单位:
Collaborative Research: ABI Innovation: Dark Ecology: Deep Learning and Massive Gaussian Processes to Uncover Biological Signals in Weather Radar
  • 批准号:
    1661259
  • 项目类别:
    Standard Grant
  • 资助金额:
    $90.33万
  • 财政年份:
    2017
  • 负责人:
    Daniel Sheldon
  • 依托单位:
国内基金
海外基金
Research on Quantum Field Theory without a Lagrangian Description
  • 批准号:
    24ZR1403900
  • 项目类别:
    省市级项目
  • 资助金额:
    --
  • 批准年份:
    2024
  • 负责人:
    SATOSHI NAWATA
  • 依托单位:
Cell Research
Cell Research
Cell Research (细胞研究)