CAREER: Imaging dynamic macromolecules in solution with x-ray lasers
CAREER: Imaging dynamic macromolecules in solution with x-ray lasers
批准号:
1943448
负责人:
Richard Kirian
金额:
$107.29万
依托单位:
依托单位国家:
美国
项目类别:
Continuing Grant
财政年份:
2020
资助国家:
美国
项目状态:
未结题
起止时间:
2020-02-15 至 2025-01-31
中文摘要
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英文摘要
An award is made to Arizona State University (ASU) for the development of new biomolecular imaging techniques that exploit the unique capabilities of ultrabright x-ray sources. The research aims to enable broadly applicable methods of visualizing dynamic motions of proteins and other biomolecules in solution at physiological temperature. The education plan integrates undergraduate and PhD students into the specific research project, as well as the broader initiative to develop ultrafast x-ray science at ASU. Opportunities are tailored to undergraduate first-generation community college transfer students to engage in mentored independent research at ASU. A team of undergraduate and PhD students will work together toward complementary research goals and will travel to large-scale laboratory facilities, such as the Linac Coherent Light Source at SLAC National lab, to learn how diverse teams of scientists work together. Student career development will be supported through cross-training opportunities at collaborator institutes, participation in international conferences, assistance with individual development plans, and other forms of mentorship. A new freely available open-source software suite will be developed as a pedagogical tool to help a broader audience of students master x-ray data analysis methods and explore new imaging concepts. A complementary optical diffractive imaging laboratory apparatus will be developed to teach experimental techniques. These hardware and software tools will be integrated into undergraduate physics curriculum at ASU and will also provide a foundation for an interactive diffractive x-ray imaging display to be showcased at public outreach events at ASU. The educational plans are highly synergistic with the existing NSF BioXFEL Science and Technology Center and the Compact X-Ray Light Source facility at ASU’s Biodesign Institute.The scientific research targets the general need for measurement techniques that can reveal detailed three- dimensional structures and functional dynamics of biomolecules such as proteins. It develops x-ray scattering methods to determine structures without the need to grow macroscopic protein crystals or to cryogenically freeze samples, both of which are requirements of existing techniques that can limit their effectiveness for dynamic molecules. X-ray free-electron lasers are used to produce snapshot scattering patterns by outrunning atomic motions with intense ultrashort x-ray pulses of just 10 femtoseconds (10-14 seconds). Unlike conventional x-ray solution scattering, the analysis of two-point intensity correlations amongst snapshot scattering patterns can directly yield three-dimensional structures, and in favorable cases allows for chemically selective imaging of atomic sub-structures embedded in complex environments. Structural changes may be sequenced in time to form “molecular movies” by delaying snapshots until shortly after reactions are triggered with light flashes, temperature jumps, or by other mechanisms. These methods are applicable to a broad variety of biomolecular systems which includes, among numerous examples, proteins that are involved in photosynthesis, vision, viral infection, and signaling processes that regulate nearly all vital processes in living cells and organisms. Model protein systems studied in the course of this research will elucidate ultrafast dynamics of light-activated protein motions. In addition to the publication of results in peer-reviewed journals and presentations at scientific conferences, x-ray scattering data and analysis software will be made publicly available and will contribute to the general development of ultrafast x-ray imaging science. Similarly, innovative hardware technologies developed in the course of the research, such as micro-nozzle designs for the production of liquid nanodroplets, will be made publicly available.This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria.
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DOI:
10.1364/optica.410851
发表时间:
2021-01-20
期刊:
OPTICA
影响因子:
10.4
作者:
[Ayyer, Kartik, Xavier, P. Lourdu, Chapman, Henry N.]
通讯作者:
Chapman, Henry N.
A new solution to the curved Ewald sphere problem for 3D image reconstruction in electron microscopy
DOI:
10.1016/j.ultramic.2021.113234
发表时间:
2021-02-27
期刊:
ULTRAMICROSCOPY
影响因子:
2.2
作者:
[Chen, J. P. J., Schmidt, K. E., Kirian, R. A.]
通讯作者:
Kirian, R. A.
DOI:
10.1016/j.bpr.2022.100081
发表时间:
2022-12-14
期刊:
BIOPHYSICAL REPORTS
影响因子:
--
作者:
[Sonker, Mukul, Doppler, Diandra, Egatz-Gomez, Ana, Zaare, Sahba, Rabbani, Mohammad T, Manna, Abhik, Cruz Villarreal, Jorvani, Nelson, Garrett, Ketawala, Gihan K, Karpos, Konstantinos, Alvarez, Roberto C, Nazari, Reza, Thifault, Darren, Jernigan, Rebecca, Oberthur, Dominik, Han, Huijong, Sierra, Raymond, Hunter, Mark S, Batyuk, Alexander, Kupitz, Christopher J, Sublett, Robert E, Poitevin, Frederic, Lisova, Stella, Mariani, Valerio, Tolstikova, Alexandra, Boutet, Sebastien, Messerschmidt, Marc, Meza-Aguilar, J Domingo, Fromme, Raimund, Martin-Garcia, Jose M, Botha, Sabine, Fromme, Petra, Grant, Thomas D, Kirian, Richard A, Ros, Alexandra]
通讯作者:
Ros, Alexandra
Numerical and experimental investigation of gas flow field variations in three-dimensional printed gas-dynamic virtual nozzles
三维打印气体动力虚拟喷嘴中气体流场变化的数值和实验研究
DOI:
10.3389/fmech.2022.958963
发表时间:
2023
期刊:
Frontiers in Mechanical Engineering
影响因子:
--
作者:
[Nazari, Reza, Ansari, Adil, Herrmann, Marcus, Adrian, Ronald J., Kirian, Richard A.]
通讯作者:
Kirian, Richard A.
Inter-Bragg crystallographic phase retrieval from shape transforms, stacking faults and substitutional disorder
从形状变换、堆垛层错和替代无序中检索布拉格间晶体相
DOI:
10.1016/j.ultramic.2023.113728
发表时间:
2023
期刊:
Ultramicroscopy
影响因子:
2.2
作者:
[Chen, J.P.J., Pande, K., Donatelli, J.J., Martin, A.V., Ayyer, K., Chapman, H.N., Bean, R., Schmidt, K.E., Kirian, R.A.]
通讯作者:
Kirian, R.A.
共 7 条
ABI Innovation: New Algorithms for Biological X-ray Free Electron Laser Data
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批准号:1565180
-
项目类别:Continuing Grant
-
资助金额:$76.16万
-
财政年份:2016
-
负责人:Richard Kirian
-
依托单位:
国内基金
海外基金
非小细胞肺癌Biomarker的Imaging MS研究新方法
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批准号:30672394
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项目类别:面上项目
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资助金额:30.0万元
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批准年份:2006
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负责人:陆豪杰
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依托单位: