Development of practical strategies to support protein crystallization for X-ray crystallography
Development of practical strategies to support protein crystallization for X-ray crystallography
批准号:
10558098
负责人:
KATO Hiroaki
金额:
$8.26万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B).
财政年份:
1999
资助国家:
日本
项目状态:
已结题
起止时间:
1999 至 2000
中文摘要
点击翻译按钮获取中文摘要
英文摘要
In this study, we have applied dynamic light scattering analysis to evaluate crystallizability of proteins. We also tried to explore practical strategy to alter the crystallizability when a protein preparation showed poor crystallizability. Finaly, we applied the strategy to some proteins that have not been crystallized yet. We did to crystallize all proteins that we tried.The following results were archived.1. We altered the crystallizability of pathogen related protein 5d (PR-5d) and determined its crystal structure at 1.8Å resolution.2. We crystallized two tropinone reductases and solved their three-dimensional structures by multiple isomorphous replacement methods independently. The results implicated the structural basis for their stereospecific reaction. We also investigated their stereospecificity by site-directed mutagenesis.3. We also succeed to synthesize its transition-state analogue inhibitor and the crystal structure of the enzyme complexed with the inhibitor was determined.4. We succeed to crystallize endopolygalacturonase from a pathogenic fungus, Stereum purpureum and pyruvate phosphate dikinase from maiz. The crystals of the endopolygalacturonase diffracted X-ray to 0.95Å resolution.5. We succeed to crystallize g-glutamylcysteine synthetase by alteration of its surface cysteine residues into serine residues. We also synthesized its transition state analogue inhibitors. Kinetic analysis using the inhibitors suggested some structural motives of the active site architecture of this enzyme.
期刊论文(41)
专著(0)
科研奖励(0)
会议论文
登录
查看更多内容
Yamashit,a,Atsuko: "Structure of tropinone reductase-II complexed with NADP+ and y-tropine at 1.9Å resolution : Imprication for Stereospecific catalysis."Biochemistry. 38. 7630-7637 (1999)
Yamashit,a,Atsuko:“1.9Å 分辨率下与 NADP+ 和 y-托品复合的托品酮还原酶-II 的结构:立体特异性催化的意义。”生物化学 38. 7630-7637 (1999)
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Tokutake, Nobuya: "Absolute Configuration of an Intermediate Cyclic Sulfoximine in the Asymmetiric Synthesis of Transition-state Analogue Inhibitors of γ-Glutamylcysteine Synthetase" Acta Crystallogr.C. in press. (1999)
Tokutake,Nobuya:“γ-谷氨酰半胱氨酸合成酶过渡态类似物抑制剂的不对称合成中中间环磺肟的绝对构型”Acta Crystallogr.C.
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Atsuko Yamashita: "Structure of tropinone reductase-II complexed with NADP^+ and Ψ-tropine at 1.9 Å resolution : Imprication for Stereospecific catalysis"Biochemistry. 38. 7630-7637 (1999)
Atsuko Yamashita:“托品酮还原酶-II 与 NADP^+ 和 Ψ-托品在 1.9 Å 分辨率下复合的结构:立体特异性催化的意义”生物化学 38. 7630-7637 (1999)。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Tokutake, Nobuya: "Design, Synthesis and Evaluation of Transition-state Analogue Inhibitors of Escherichia coli γ-Glutamylcysteine Synthetase" Bioorg.& Med.Chem.6. 1935-1953 (1998)
Tokutake,Nobuya:“大肠杆菌γ-谷氨酰半胱氨酸合成酶的过渡态类似抑制剂的设计、合成和评估”Bioorg.& Med.Chem.6 (1998)。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Hisashi Koiwa: "Crystal structure of tobacco PR-5d, an antifungal thaumatin like protein at 1.8 Å resolution"Journal of Molecular Biology. 286. 1137-1145 (1999)
Hisashi Koiwa:“烟草 PR-5d 的晶体结构,一种分辨率为 1.8 Å 的抗真菌奇异果甜蛋白”,《分子生物学杂志》286. 1137-1145 (1999)。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
共 16 条
Recognition of pathogen-derived sphingolipid in plants.
-
批准号:20K15528
-
项目类别:Grant-in-Aid for Early-Career Scientists
-
资助金额:$2.66万
-
财政年份:2020
-
负责人:KATO Hiroaki
-
依托单位:
Structural basis for discrimination between multi-drug exporters and lipid floppies
-
批准号:19K22495
-
项目类别:Grant-in-Aid for Challenging Research (Exploratory)
-
资助金额:$4.16万
-
财政年份:2019
-
负责人:KATO Hiroaki
-
依托单位:
Structural basis for optimization of molecular probe using P-glycoprotein in vivo imaging
-
批准号:24659018
-
项目类别:Grant-in-Aid for Challenging Exploratory Research
-
资助金额:$2.41万
-
财政年份:2012
-
负责人:KATO Hiroaki
-
依托单位:
Protein structural data mining based on the Neighborhood Fragment Spectra representation
-
批准号:22500130
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.33万
-
财政年份:2010
-
负责人:KATO Hiroaki
-
依托单位:
Studies on stability of fission yeast heterochromatin and its regulators
-
批准号:21870024
-
项目类别:Grant-in-Aid for Research Activity Start-up
-
资助金额:$1.76万
-
财政年份:2009
-
负责人:KATO Hiroaki
-
依托单位:
High frequency and high field magnetic resonance in panoscopic- assembled rare earth magnets
-
批准号:20900111
-
项目类别:
-
资助金额:$0.0万
-
财政年份:2008
-
负责人:KATO Hiroaki
-
依托单位:
A Modeling of Prosody Perception for Second Language Learning
-
批准号:20300069
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$11.98万
-
财政年份:2008
-
负责人:KATO Hiroaki
-
依托单位:
Three-dimensional structural similarity search of proteins based on Geometrical Fragment Spectra
-
批准号:19700139
-
项目类别:Grant-in-Aid for Young Scientists (B)
-
资助金额:$2.43万
-
财政年份:2007
-
负责人:KATO Hiroaki
-
依托单位:
Struchural biology of membrane protein trabsporters
-
批准号:17380066
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$9.91万
-
财政年份:2005
-
负责人:KATO Hiroaki
-
依托单位:
Basic Study on Decentralized Society : role of State Governments in the USA and Provincial governments in Canada
-
批准号:16310166
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$7.55万
-
财政年份:2004
-
负责人:KATO Hiroaki
-
依托单位:
Mathematical modeling of the temporal acpects of speech based on human perceptual and cognitive mechanisms
-
批准号:16200016
-
项目类别:Grant-in-Aid for Scientific Research (A)
-
资助金额:$31.62万
-
财政年份:2004
-
负责人:KATO Hiroaki
-
依托单位:
Forefront X-Ray Crystallography of Enzymes by using the third generation synchrotron radiation
-
批准号:13460046
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$8.26万
-
财政年份:2001
-
负责人:KATO Hiroaki
-
依托单位:
Structural basis for bioluminescence - X-ray.structural analysis of firefly luciferase from Luciola cruciata
-
批准号:10660082
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$1.92万
-
财政年份:1998
-
负责人:KATO Hiroaki
-
依托单位:
Fabrication of high-potential nanocomposite magnets by controlling crystallite orientation
-
批准号:09650002
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.18万
-
财政年份:1997
-
负责人:KATO Hiroaki
-
依托单位:
Development of a new culture model for the screening of a agent to increase the bone formation
-
批准号:05557118
-
项目类别:Grant-in-Aid for Developmental Scientific Research (B)
-
资助金额:$4.1万
-
财政年份:1993
-
负责人:KATO Hiroaki
-
依托单位:
Systematic Research on High-Field Magnetization Process in Nd_2Fe_<14>B-type Mixed Compounds
-
批准号:01540262
-
项目类别:Grant-in-Aid for General Scientific Research (C)
-
资助金额:$1.15万
-
财政年份:1989
-
负责人:KATO Hiroaki
-
依托单位:
海外基金