Systematic genome function analysis based upon intersubspecific comsomic strains
Systematic genome function analysis based upon intersubspecific comsomic strains
批准号:
16011258
负责人:
SHIROISHI Toshihiko
金额:
$15.36万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research on Priority Areas
财政年份:
2004
资助国家:
日本
项目状态:
已结题
起止时间:
2004 至 --
中文摘要
我们用MSM/Ms菌株的染色体替换C57BL/6J菌株的染色体,培育了一系列经济型小鼠菌株。由于C57BL/6J起源于西欧小家鼠亚种,而MSM/Ms起源于亚洲小家鼠亚种,因此已建立的菌株应称为亚种间经济型菌株。通过使用这些小鼠菌株,我们能够定位C57BL/6J和MSM/Ms菌株之间不同的控制表型的基因座。在这项研究中,我们进一步建立了实验系统,使我们能够基于经济菌株的表型探索小鼠基因组功能。首先,我们开发了一套冷冻精子和胚胎保存系统。其次,我们发现x染色体染色体染色体株表现为雄性不育,精子形态异常。我们进行了QTL分析,成功地定位了与该雄性不育有关的三个位点。第三,为了阐明经济菌株可以分析的表型,我们收集了经济亲本菌株C57BL/6j和MSM/Ms的综合表型数据。最后,我们对所有经济菌株的一些形态性状进行表型分析,包括生长曲线和行为性状、焦虑和家庭笼活动。因此,我们可以绘制出许多有趣的表型。
英文摘要
We had developed a series of consomic mouse strains by substituting chromosomes of C57BL/6J strain by corresponding chromosomes of MSM/Ms strain. Because C57BL/6J originated from West European subspecies, Mus musculus domesticus, and MSM/Ms from Asian subspecies, M.m. molossinus, established strains should be referred to as intersubspecific consomic strains. By using these mouse strains, we are able to map loci controlling phenotypes that are different between C57BL/6J and MSM/Ms strains. In this study, we have further established experimental systems that enable us to explore the mouse genome functions, based upon phenotyping of the consomic strains. First, we developed a system for preservation of the strains as frozen sperms and embryos. Second, we found that X-chromosome consomic strain exhibits male sterility with abnormal morphology of sperms. We conducted QTL analysis, and successfully map three loci responsible for this male sterility. Third, in order to elucidate phenotypes that can be analyzed by the consomic strains, we have collected comprehensive, phenotype data of consomic parental stains, C57BL/6j and MSM/Ms. Finally, we executed phenotyping of all consomic strains for some of morphological traits including growth curve and behavioural traits, anxiety and home-cage activity. As a result, we could map a number of intriguing phenotypes.
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DOI:
10.1016/j.gene.2004.11.050
发表时间:
2005-04-11
期刊:
GENE
影响因子:
3.5
作者:
[Ogasawara, M, Imanishi, T, Koide, T]
通讯作者:
Koide, T
Hybrid Breakdown Caused by Substitution of X Chromosome between Two Mouse Subspecies.
两个小鼠亚种之间 X 染色体替换引起的杂交破坏。
DOI:
--
发表时间:
2004
期刊:
Genetics 166
影响因子:
--
作者:
[Yoshii, T., Funada, Y., Ibuki, T., Matsumoto, A., Tanimura, T., Tomioka, K., Takehiro Kusakabe, Edgar A.Otto, Reiko Yoshida, Takehiro Kusakabe, Hironori Ando, 日下部 岳広, Shiina T, International Chicken Genome Sequencing Consortium, Shiina T, Kulski JK, Hurt P, Shiina T, Ogasawara M., Ogasawara M. et al., Sakai T., Oka A.]
通讯作者:
Oka A.
Phylogenic conservation of a cis-acting regulator that controls polarized expression of Sonic hedgehog (Shh) in limb buds.
控制肢芽中音刺猬 (Shh) 极化表达的顺式作用调节因子的系统发育保守性。
DOI:
--
发表时间:
2004
期刊:
Mamm. Genome 15
影响因子:
--
作者:
[Yoshii, T., Funada, Y., Ibuki, T., Matsumoto, A., Tanimura, T., Tomioka, K., Takehiro Kusakabe, Edgar A.Otto, Reiko Yoshida, Takehiro Kusakabe, Hironori Ando, 日下部 岳広, Shiina T, International Chicken Genome Sequencing Consortium, Shiina T, Kulski JK, Hurt P, Shiina T, Ogasawara M., Ogasawara M. et al., Sakai T., Oka A., Sagai T.]
通讯作者:
Sagai T.
DOI:
10.1007/s10519-005-9038-3
发表时间:
2006-09-01
期刊:
BEHAVIOR GENETICS
影响因子:
2.6
作者:
[Takahashi, Aki, Kato, Katsunori, Koide, Tsuyoshi]
通讯作者:
Koide, Tsuyoshi
DOI:
10.1007/s00344-004-3013-9
发表时间:
2005-01-01
期刊:
MAMMALIAN GENOME
影响因子:
2.5
作者:
[Sakai, T, Kikkawa, Y, Yonekawa, H]
通讯作者:
Yonekawa, H
共 8 条
Experimental evolutionary study of limb morphogenesis by a constitutive approach
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批准号:17K19411
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项目类别:Grant-in-Aid for Challenging Research (Exploratory)
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资助金额:$4.16万
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财政年份:2017
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依托单位:
Mutation burst by conflict of two mouse subspecies genomes
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财政年份:2011
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依托单位:
Gene regulation via dynamic change of chromosomal conformation of remote enhancers
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财政年份:2009
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负责人:SHIROISHI Toshihiko
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依托单位:
Genetic regulation of tissue-specific Shh expression by long-range enhancers and chromosome dynamics
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批准号:19370003
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$11.56万
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财政年份:2007
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负责人:SHIROISHI Toshihiko
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依托单位:
Functional Genomics based upon mouse inter-subspecific consomic strain
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批准号:17018033
-
项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$114.75万
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财政年份:2005
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负责人:SHIROISHI Toshihiko
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依托单位:
Limb bud-specific Shh enhancer that is 1Mb apart from Shh coding sequence
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批准号:17370003
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.34万
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财政年份:2005
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负责人:SHIROISHI Toshihiko
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依托单位:
Research for the genetic mechanism of reproductive isolation between two mouse subspecies
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批准号:14340239
-
项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$8.9万
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财政年份:2002
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负责人:SHIROISHI Toshihiko
-
依托单位:
Mous Saturation mutagenesis project:Construction of sperm bank for chromosome deletion mutants and development of screening system for the mutations
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批准号:10358019
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$26.24万
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财政年份:1998
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负责人:SHIROISHI Toshihiko
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依托单位:
Positional cloning of mouse morphological mutants
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批准号:09440257
-
项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$8.7万
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财政年份:1997
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负责人:SHIROISHI Toshihiko
-
依托单位:
Establishment of Mouse Consomic Lines
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批准号:07558116
-
项目类别:Grant-in-Aid for Scientific Research (A)
-
资助金额:$11.52万
-
财政年份:1995
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负责人:SHIROISHI Toshihiko
-
依托单位:
RESEARCH FOR MECHANISM OF HOMOLOGOUS CHROMOSOMAL RECOMBINATION IN MOUSE MEIOSIS
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批准号:06454006
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$4.54万
-
财政年份:1994
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负责人:SHIROISHI Toshihiko
-
依托单位:
海外基金