Development of a database of gene trees and species trees

基因树和物种树数据库的开发

• 批准号: 07554046
• 负责人: SAITOU Naruya
• 金额: $ 11.65万
• 依托单位: National Institute of Genetics
• 依托单位国家: 日本
• 项目类别: Grant-in-Aid for Scientific Research (A)
• 财政年份: 1995
• 资助国家: 日本
• 起止时间: 1995 至 1997
• 项目状态: 已结题
• 来源: https://kaken.nii.ac.jp/grant/KAKENHI-PROJECT-07554046/
• 关键词: Molecular Evolution; Molecular Tree; Taxonomy; Tree View; Dendro Maker

We created a database of phylogenetic trees, and named it "Jungle". Academic journals in which molecular phylogenetic trees frequently appear were, searched, and images of figures that present phylogenetic trees are Database Jungle were obatained from a scanner, then those were annotated. Journals searched were Molecular Biology and Evolution, Journal of Molecular Evolution, Molecular Phylogenetics and Evolution, Nature, Science, Proceedings of National Academy of Sciences, Genetics, Genes and Genetic Systems (formerly Japanese Journal of Genetics), Zoological Science, Evolution, Systematic Botany, and American Journal of Botany. This database is available via WWW (World Wide Wed) and its URL is http : //smiler.lab.nig.ac.jp/jungle/jungle.html. We also plan to distribute its CDROM to interested researchers.

我们创建了一个系统发育树数据库，并将其命名为“丛林”。检索经常出现分子系统发育树的学术期刊，从数据库丛林中获得呈现系统发育树的图像，然后对其进行注释。检索的期刊包括Molecular Biology and Evolution、Journal of Molecular Evolution、Molecular Phylogenetics and Evolution、Nature、Science、Proceedings of National Academy of Sciences、Genetics、Genes and Genetic Systems（原Japanese Journal of Genetics）、Zoological Science、Evolution、Systematic Botany和American Journal of Botany。该数据库可通过WWW（万维网）获得，其URL为http：//smiler.lab.nig.ac.jp/jungle/jungle.html。我们还计划向感兴趣的研究人员分发光盘。

项目成果

Ogasawara K.et al.: "Molecular genetic analysis of the variant phenotypes of ABO blood group system" Blood. 88・7. 2732-2737 (1996)

Ogasawara K.等：“ABO血型系统变异表型的分子遗传学分析”血液88・7 2732-2737（1996）。

Oota H.: "A genetic study of 2,000-year-old human remains from Japan using mitochondrial DNA sequences." American Journal of Physical Anthropology. 98. 133-145 (1995)

Oota H.：“利用线粒体 DNA 序列对日本 2000 年前的人类遗骸进行基因研究。”

Shiina T.: "Isolation and characterization of cDNA clones for Japanese quail(Coturnix japonica) major histocompatibility complex(MhcCoja)class Imolecules." Immunogenetics. 42. 13-216 (1995)

Shiina T.：“日本鹌鹑 (Coturnix japonica) 主要组织相容性复合物 (MhcCoja) 类分子 cDNA 克隆的分离和表征。”

齋藤成也: "『遺伝子は35億年の夢を見る-バクテリアから人間の進化まで-』" 山和書房,東京, 229 (1997)

Seiya Saito：“‘35亿年的基因梦想 - 从细菌到人类进化’”山和书房，东京，229（1997）

Ohtsuka H.et al.: "The presence/absence polymorphism and evolution of p53 pseudogene within the genus Mus" Molecular Phylogenetics and Evolution. 5・3. 548-556 (1996)

Ohtsuka H.等人：“Mus属内p53假基因的存在/不存在和进化”《分子系统发育与进化》5·3（1996）。