Development of genotyping method for TT virus (TTV) and its application to elucidation of pathogenesis.
Development of genotyping method for TT virus (TTV) and its application to elucidation of pathogenesis.
批准号:
13357003
负责人:
OKAMOTO Hiroaki
金额:
$17.22万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (A)
财政年份:
2001
资助国家:
日本
项目状态:
已结题
起止时间:
2001 至 2003
中文摘要
1997年,我们从一名输血后急性肝炎患者的血清中分离到一种新的DNA病毒,并将其命名为TT病毒(TTV)。的索引患者。最近,国际病毒分类委员会(ICTV)的TTV研究小组提出了TTV的分类命名法:该项目的首席研究员(H.O.)是研究小组的成员它被命名为Torque Teno病毒(TTV):这个名字来自“Torque”,意思是项链,“Tenuis”意思是薄,与其DNA基因组的环状单链性质有关。TTV被归类为一个新的漂浮属,即Anelovirus属,该属尚未被分配到一个科。该属的名称Anellovirus来自“anello”,意思是环,与DNA基因组的环状性质有关。TTV作为DNA病毒具有广泛的序列差异,已经鉴定了大约40种基因型。在本研究中,我们进一步将它们分为5个远缘遗传组(组1-5),并开发了一种选择性PCR方法,使用特异性寡核苷酸引物的TTV的5个遗传组的每个TTV分类到5个遗传组。使用这种PCR方法,我们研究了TTV的五个遗传组的患病率与年龄的关系。第4组TTV流行于幼儿期,在五个已知的遗传组中,最常在成年期检测到。第1组TTV在> 6个月的婴儿中检出。其发生率随年龄增长而增加,成年期为10-15%。第3组TTV基因型最多(包括SENV基因型A ~ H在内的15种基因型),成年后与第1组TTV和/或第4组TTV共感染。目前,我们已经建立了一种实时定量检测第1、2、3、4、5组TTV的方法,并尝试将其应用于临床调查。
英文摘要
In 1997, we isolated a novel DNA virus from the serum of a patient with posttransfusion acute hepatitis of unknown etiology and named it TT virus (TTV) after the initials (T.T.) of the index patient. Recently, taxonomic nomenclature for TTV has been proposed by the TTV study group of the International Committee on Taxonomy of Viruses (ICTV) : head investigator of this project (H.O.) was a member of the study group. It was designated as Torque Teno virus (TTV): this name was derived from "Torque" which means the necklace, and "Tenuis" means thin, and relates to circular, single-stranded nature of its DNA genome. TTV was classified into a novel floating genus, the Anellovirus genus, which has not yet been assigned to a family. The name of the genus, Anellovirus, was derived from "anello," which means the ring, and relates to the circular nature of the DNA genome. TTV has a wide range of sequence divergence for a DNA virus, and approximately 40 genotypes have been identified. In the present study, we classified them further into five distantly related genetic groups (Groups 1-5), and developed a selective PCR method using oligonulceotide primers specific for TTVs of each of the five genetic groups to classify TTVs into the five genetic groups. Using this PCR method, we examined the prevalence of five genetic groups of TTV in relation to age. TTVs of group 4 were prevalent in early childhood, and detected most frequently in adulthood among the five known genetic groups. TTVs of group 1were detectable in infants aged> 6 months. Its frequency increased with age and was 10-15% in adulthood. TTVs of group 3 comprised the greatest number of genotypes (15 genotypes including SENV of genotypes A to H), were coinfected with TTVs of group 1 and/or TTVs of group 4 in adulthood. Presently, we have established a real-time detection method for quantitating TTVs of group 1,2,3,4 or 5 with an attempt to apply it to clinical surveys.
期刊论文(26)
专著(0)
科研奖励(0)
会议论文
登录
查看更多内容
Asabe S.: "Phosphorylation of serine-rich protein encoded by open reading frame 3 of the TT virus genome"Biochemical and Biophysical Research Communications. 286. 298-304 (2001)
Asabe S.:“TT 病毒基因组开放阅读框 3 编码的富含丝氨酸的蛋白质的磷酸化”《生物化学和生物物理研究通讯》。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Okamoto H, et al.: "Genomic characterization of TT viruses (TTVs) in pigs, cats and dogs and their relatedness with species-specific TTVs in primates and tupaias."J Gen Virol. 83. 1291-1297 (2002)
Okamoto H 等人:“猪、猫和狗中 TT 病毒 (TTV) 的基因组特征及其与灵长类动物和树鼩中物种特异性 TTV 的相关性。”J Gen Virol。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Peng Y. H.: "analysis of the entire genomes of thirteen TT virus variants classifiable into the fourth and fifth genetic groups, isolated from viremic infants"Archives of Virology. 147. 21-41 (2002)
Peng Y. H.:“对从病毒血症婴儿中分离出的可分为第四和第五遗传组的 13 种 TT 病毒变种的整个基因组进行分析”病毒学档案。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Yokoyama, H.: "Pathological changes of renal epithelial cells in mice transgenic for the TT virus ORF1 gene"Journal of General Virology. 83. 141-150 (2002)
Yokoyama, H.:“TT病毒ORF1基因转基因小鼠肾上皮细胞的病理变化”普通病毒学杂志。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
Kato S.: "Helicobacter pylori and TT virus prevalence in Japanese children"Journal of Gastroenterology. 38. 1126-1130 (2003)
Kato S.:“日本儿童中幽门螺杆菌和 TT 病毒的流行”胃肠病学杂志。
DOI:
--
发表时间:
期刊:
影响因子:
--
作者:
[]
通讯作者:
共 21 条
Research on release mechanism, genome mutations and cellular receptor of hepatitis E virus (HEV) using cell culture systems for HEV
-
批准号:22390090
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$11.73万
-
财政年份:2010
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Genomic and proteomic characterizations of the central nervous system tumors
-
批准号:19791003
-
项目类别:Grant-in-Aid for Young Scientists (B)
-
资助金额:$2.23万
-
财政年份:2007
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Characterization of hepatitis E virus (HEV) particles and analysis of replication mechanism by using a cell culture system for HEV
-
批准号:19390134
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$11.81万
-
财政年份:2007
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Molecular epidemiological analysis of hepatitis E as a zoonosis and investigation toward its prevention
-
批准号:16390137
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$9.28万
-
财政年份:2004
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Study of Light Induced Effects on the Carrier Transport Property in Amorphous Silicon
-
批准号:13650345
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.5万
-
财政年份:2001
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Analysis of replication and transcription mechanisms in a newly discovered circular, single-stranded DNA virus (TTV)
-
批准号:13470067
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$6.85万
-
财政年份:2001
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Study of Light-induced Structural Change in Hydrogenated Amorphous Silicon by the Glancing-angle Polarized Electroabsorption Technique
-
批准号:11650325
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.18万
-
财政年份:1999
-
负责人:OKAMOTO Hiroaki
-
依托单位:
A Study of Noise Reducing by Reform on Road Surface for Concrete Pavement
-
批准号:10555150
-
项目类别:Grant-in-Aid for Scientific Research (B).
-
资助金额:$4.29万
-
财政年份:1998
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Photo-Induced Structural Change in Hydrogenated Amorphous Silicon
-
批准号:09650357
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$2.3万
-
财政年份:1997
-
负责人:OKAMOTO Hiroaki
-
依托单位:
ANALYSIS OF GENOMIC STRUCTURE OF HEPATITIS G VIRUS (GBV-C/HGV) AND DEVELOPMENT OF SENSITIVE DETECTION SYSTEM OF THE VIRAL GENOME
-
批准号:09470087
-
项目类别:Grant-in-Aid for Scientific Research (B).
-
资助金额:$6.66万
-
财政年份:1997
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Study of Carrier Transport Property in Amorphous Semiconductors by Light Excited Hall effect
-
批准号:07650376
-
项目类别:Grant-in-Aid for Scientific Research (C)
-
资助金额:$1.34万
-
财政年份:1995
-
负责人:OKAMOTO Hiroaki
-
依托单位:
PURIFICATION OF HEPATITIS C VIRUS PARTICLES AND ANALYSIS OF ITS STRUCTURAL PROTEINS
-
批准号:06454212
-
项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$3.2万
-
财政年份:1994
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Characterization of Sturctural Disorder by means of Polarized Photoreflectance in Amorphous Semiconductors
-
批准号:05650305
-
项目类别:Grant-in-Aid for General Scientific Research (C)
-
资助金额:$1.34万
-
财政年份:1993
-
负责人:OKAMOTO Hiroaki
-
依托单位:
"Fundamental Research on Amorphous Silicon Photosensor with Internal Multiplication Function"
-
批准号:03650325
-
项目类别:Grant-in-Aid for General Scientific Research (C)
-
资助金额:$1.47万
-
财政年份:1991
-
负责人:OKAMOTO Hiroaki
-
依托单位:
Development of amorphous SiC light emitting diodes
-
批准号:62850057
-
项目类别:Grant-in-Aid for Developmental Scientific Research
-
资助金额:$4.74万
-
财政年份:1987
-
负责人:OKAMOTO Hiroaki
-
依托单位: