Elucidation of gene regulation mechanism by which corneal epithelial cells achieve their specific differeatiation status, especially those regarding to corneal epithelial cell-specific transcription factor

阐明角膜上皮细胞实现其特定分化状态的基因调控机制,特别是与角膜上皮细胞特异性转录因子有关的基因调控机制

基本信息

  • 批准号:
    18390472
  • 负责人:
  • 金额:
    $ 11.28万
  • 依托单位:
  • 依托单位国家:
    日本
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
  • 财政年份:
    2006
  • 资助国家:
    日本
  • 起止时间:
    2006 至 2007
  • 项目状态:
    已结题

项目摘要

Keratin 12 is a gene that is specifically expressed in corneal epithelial cells. In this study, we investigated whether such a tissue-specific expression is controlled by the genomic methylation status. First, we evaluated keratin 12 gene expression among various types of human keratinocyte cells. As has been reported by many researchers, keratin 12 was only expressed in in vivo corneal epithelial cells. Surprisingly and notably, subcultured primary human corneal epithelial cells (hCEC) and immortalized hCEC did not express keratin 12. We then treated the immortalized hCEC by 5-aza-cytidine, a demethylation agent and TSA, a histone deacetylase inhibitor to see whether such a tissue-specific gene expression of keratin 12 involved an epigenetic gene regulation mechanism. We subsequently discovered that those cells express keratin 12. Next, we performed bisulfite sequencing analysis to see the methylation status of keratin 12 among various kinds of in vivo keratinocyte cells. As a result, we found that keratin 12 was in the hypomethylated status in in vivo corneal epithelial cells, while other keratinocyte cells exhibited hypermethylation of keratin 12. Also, the subcultured primary hCEC (P6, P7, and P8) and the immortalized hCEC exhibited hypermethylation of keratin 12. We then tested the hypothesis that the culture process may affect the genomic methylation status. We performed repeated culture of hCEC from in vivo to P6 and subjected each of these cells to bisulfite sequencing analysis. We found that the keratin-12 methylation rate was gradually increased by the number of passage. Finally, we evaluated the methylation status of the limbal basal epithelial cells, which have been reported to contain the stem cells of the corneal epithelial cells: We found that keratin 12 was in the hypermethylated status in these cells, suggesting that keratin 12 may be demethylated when the limbal basal cells are differentiated into corneal epithelial cells.
角蛋白12是一种在角膜上皮细胞中特别表达的基因。在这项研究中,我们研究了这种组织特异性表达是否受基因组甲基化状态控制。首先,我们评估了各种人角质形成细胞中角蛋白12基因的表达。正如许多研究人员报道的那样,角蛋白12仅在体内角膜上皮细胞中表达。 Surprisingly and notably, subcultured primary human corneal epithelial cells (hCEC) and immortalized hCEC did not express keratin 12. We then treated the immortalized hCEC by 5-aza-cytidine, a demethylation agent and TSA, a histone deacetylase inhibitor to see whether such a tissue-specific gene expression of keratin 12 involved an epigenetic gene regulation 机制。随后,我们发现这些细胞表达角蛋白12。接下来,我们进行了硫酸盐测序分析,以查看各种体内角质形成细胞中角蛋白12的甲基化状态。结果,我们发现角蛋白12处于体内角膜上皮细胞中的低甲基化状态,而其他角质形成细胞则表现出角蛋白12的高甲基化。此外,亚培养的原发性HCEC(P6,P7和P8)以及不成熟的HCEC均具有超含量的促成促成的促成促成的凯辛碱基化的过程。基因组甲基化状态。我们从体内到P6进行了HCEC的重复培养,并将这些细胞中的每一个都进行了亚硫酸盐测序分析。我们发现角蛋白12甲基化速率随通道数量逐渐提高。最后,我们评估了缘含量的基础上皮细胞的甲基化状态,据报道,这些细胞包含角膜上皮细胞的干细胞:我们发现,角蛋白12在这些细胞中处于高甲基化状态,这表明角蛋白12可能是当叶片基底细胞分化为角膜细胞的细胞时可能被脱甲基化的。

项目成果

期刊论文数量(0)
专著数量(0)
科研奖励数量(0)
会议论文数量(0)
专利数量(0)
Corneal epithelial stem cells and differentiation
角膜上皮干细胞及其分化
  • DOI:
  • 发表时间:
    2007
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Shimizu N;Watanabe H;Kubota J;Wu J;Saito R;Yokoi T;Era T;Iwatsubo T;Watanabe T;Nishina S;Azuma N;Katada T;Nishina H.;木下 茂
  • 通讯作者:
    木下 茂
Different expression of angiogenesis-related factors between human cultivated corneal and oral epithelial sheets
  • DOI:
    10.1016/j.exer.2006.02.015
  • 发表时间:
    2006-10-01
  • 期刊:
  • 影响因子:
    3.4
  • 作者:
    Sekiyama, Eiichi;Nakamura, Takahiro;Kinoshita, Shigeru
  • 通讯作者:
    Kinoshita, Shigeru
Establishment of a cultivated human conjunctival epit helium as an alternative tissue source for autologous come al epithelial transplantation
建立培养的人结膜上皮氦作为自体上皮移植的替代组织来源
  • DOI:
  • 发表时间:
    2006
  • 期刊:
  • 影响因子:
    0
  • 作者:
    Tanioka;H.;Kawasaki;S.;Yamasaki;K.;Ang L.P.;Koizumi;N.;Nakamura;T.;Yokoi;N.;Komuro;A.;Inatomi;T.;Kinoshita;S
  • 通讯作者:
    S
Establishment of a cultivated human conjunctival epithelium as an alternative tissue source for autologous corneal epithelial transplantation
Clusters of corneal epithelial cells reside ectopically in human conjunctival epithelium
{{ item.title }}
{{ item.translation_title }}
  • DOI:
    {{ item.doi }}
  • 发表时间:
    {{ item.publish_year }}
  • 期刊:
  • 影响因子:
    {{ item.factor }}
  • 作者:
    {{ item.authors }}
  • 通讯作者:
    {{ item.author }}

数据更新时间:{{ journalArticles.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ monograph.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ sciAawards.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ conferencePapers.updateTime }}

{{ item.title }}
  • 作者:
    {{ item.author }}

数据更新时间:{{ patent.updateTime }}

KINOSHITA Shigeru其他文献

KINOSHITA Shigeru的其他文献

{{ item.title }}
{{ item.translation_title }}
  • DOI:
    {{ item.doi }}
  • 发表时间:
    {{ item.publish_year }}
  • 期刊:
  • 影响因子:
    {{ item.factor }}
  • 作者:
    {{ item.authors }}
  • 通讯作者:
    {{ item.author }}

{{ truncateString('KINOSHITA Shigeru', 18)}}的其他基金

Identification of master transcription factors in corneal epithelial cells
角膜上皮细胞中主转录因子的鉴定
  • 批准号:
    23390404
  • 财政年份:
    2011
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
The development of basic technologies for the cellular therapy of corneal epithelial cells by the regulation of cellular senescence and epigenetic changes
通过调控细胞衰老和表观遗传变化进行角膜上皮细胞治疗的基础技术的发展
  • 批准号:
    20390451
  • 财政年份:
    2008
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Identification and clinical application of ectopic corneal epithelial cells in conjunctival epithelium
结膜上皮异位角膜上皮细胞的鉴定及临床应用
  • 批准号:
    16390502
  • 财政年份:
    2004
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Identification of genes involved in emerging cellular properties of corneal epithelial stem cells and its specific differentiation
角膜上皮干细胞新兴细胞特性及其特异性分化相关基因的鉴定
  • 批准号:
    14370563
  • 财政年份:
    2002
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Functional analysis and genomic mapping of corneal epithelium-specific genes and detection of disease-related genes among ocular surface disorders.
角膜上皮特异性基因的功能分析和基因组图谱以及眼表疾病中疾病相关基因的检测。
  • 批准号:
    12470367
  • 财政年份:
    2000
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Development of cultivated corneal epithelial cells on amniotic membrane
羊膜上培养角膜上皮细胞的发育
  • 批准号:
    12557149
  • 财政年份:
    2000
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Isolation and functional analysis of genes uniquely expressed in human corneal epithelium and conjunctival epithelium
人角膜上皮和结膜上皮独特表达基因的分离和功能分析
  • 批准号:
    10470365
  • 财政年份:
    1998
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (B)
Developement of optical coherence tomography and its ophthalmologic application
光学相干断层扫描技术的发展及其眼科应用
  • 批准号:
    07557111
  • 财政年份:
    1995
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for Scientific Research (A)
Gene expression analysis of human corneal and conjunctival epithelium by random cDNA sequencing
通过随机 cDNA 测序分析人角膜和结膜上皮的基因表达
  • 批准号:
    06454500
  • 财政年份:
    1994
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (B)
Surgical Rehabilitation of Ocular Surface : Epithelial Transplantation
眼表手术康复:上皮移植
  • 批准号:
    04454442
  • 财政年份:
    1992
  • 资助金额:
    $ 11.28万
  • 项目类别:
    Grant-in-Aid for General Scientific Research (B)

相似国自然基金

SUZ12调控HP1α沉默TET1抑制胆管癌相关基因启动子CpG岛“去甲基化”的机制研究
  • 批准号:
  • 批准年份:
    2021
  • 资助金额:
    54.7 万元
  • 项目类别:
    面上项目
高血糖介导BMI1基因异常活化诱导DNA CpG岛去甲基化促进糖尿病肾病的作用和机制研究
  • 批准号:
  • 批准年份:
    2021
  • 资助金额:
    30 万元
  • 项目类别:
    青年科学基金项目
SMYD3桥接组蛋白甲基化与CpG岛DNA甲基化双重调控靶基因ERβ表达促进子宫内膜异位症进展的机制研究
  • 批准号:
    82101727
  • 批准年份:
    2021
  • 资助金额:
    24.00 万元
  • 项目类别:
    青年科学基金项目
SMYD3桥接组蛋白甲基化与CpG岛DNA甲基化双重调控靶基因ERβ表达促进子宫内膜异位症进展的机制研究
  • 批准号:
  • 批准年份:
    2021
  • 资助金额:
    30 万元
  • 项目类别:
    青年科学基金项目
SUZ12调控HP1α沉默TET1抑制胆管癌相关基因启动子CpG岛“去甲基化”的机制研究
  • 批准号:
    82173069
  • 批准年份:
    2021
  • 资助金额:
    55.00 万元
  • 项目类别:
    面上项目

相似海外基金

PARP1-Chromatin and NAD-Metabolism in EBV Epithelial Cancers
EBV 上皮癌中的 PARP1-染色质和 NAD-代谢
  • 批准号:
    10627691
  • 财政年份:
    2023
  • 资助金额:
    $ 11.28万
  • 项目类别:
Project 4: Regulation of EBV Latency and Oncogenesis by Hypoxia
项目4:缺氧对EBV潜伏期和肿瘤发生的调节
  • 批准号:
    10714176
  • 财政年份:
    2023
  • 资助金额:
    $ 11.28万
  • 项目类别:
Methionine and PI3K Metabolism Drive CIMP in EBV Epithelial Cancers
蛋氨酸和 PI3K 代谢驱动 EBV 上皮癌中的 CIMP
  • 批准号:
    10627692
  • 财政年份:
    2023
  • 资助金额:
    $ 11.28万
  • 项目类别:
Chemical Probes and Drug Discovery
化学探针和药物发现
  • 批准号:
    10627694
  • 财政年份:
    2023
  • 资助金额:
    $ 11.28万
  • 项目类别:
Development of blood-based methylation biomarkers for CRC risk prediction
开发用于 CRC 风险预测的血液甲基化生物标志物
  • 批准号:
    10712300
  • 财政年份:
    2023
  • 资助金额:
    $ 11.28万
  • 项目类别:
{{ showInfoDetail.title }}

作者:{{ showInfoDetail.author }}

知道了