X-ray crystallographic studies of intr- and inter-cellular transport
X-ray crystallographic studies of intr- and inter-cellular transport
批准号:
21227003
负责人:
TSUKIHARA Tomitake
金额:
$150.51万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (S)
财政年份:
2009
资助国家:
日本
项目状态:
已结题
起止时间:
2009-05-11 至 2014-03-31
中文摘要
进行了三种与运输有关的结构研究。首先是pre-miRNA的核输出机制。二是细胞内携带物质的拱顶结构研究。三是缝隙结通道的结构-功能研究。Exportin-5:RanGTP:Pre-miRNA复合物、Exportin-5:RanGTP复合物和Exportin-5的结构分别在2.9、3.0和3.5 A的分辨率下测定。通过比较三种不同状态下exportin-5s的结构和分析Pre-miRNA与Exportin-5的相互作用,我们阐明了Exportin-5:RanGTP复合物运输Pre-miRNA的机制。除了来自大鼠肝脏的拱顶外,我们还确定了mvp拱顶的39倍对称性。从而证实了拱顶的39倍对称性。基于connexin-26隙结通道的同源性建模和功能分析,阐明了半通道对的对接选择规律。
英文摘要
Three kinds of structural research relating to the transportation were carried out. The first is the nuclear export mechanism of pre-miRNA. The second is structural study of vault that carries materials in the cell. The third is structural-functional studies of gap junction channels.Structures of Exportin-5:RanGTP:Pre-miRNA complex, Exportin-5:RanGTP complex and Exportin-5 were determined at respective 2.9, 3.0 and 3.5 A resolutions. Comparing structures of exportin-5s in three different states and analyzing interactions between Pre-miRNA and Exportin-5, we elucidated Pre-miRNA transportation mechanism by Exportin-5:RanGTP complex. We have determined the 39-fold symmetry for the MVP-vault in addition to the vault from rat liver. Consequently, the 39-fold symmetry of vault was confirmed. We elucidated docking selectivity rules for hemichannel pairs by homology modeling based on the connexin-26 gap junction channel and functional analyses.
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Spring-8 生体超分子複合体構造解析ビームライン(大阪大学蛋白質研究所)BL44XU の現状
Spring-8 用于生物超分子复合物结构分析的 BL44XU 光束线现状(大阪大学蛋白质研究所)
DOI:
--
发表时间:
2013
期刊:
影响因子:
--
作者:
[A Mine, K Hyodo, et al.,, M.Miya, 山下栄樹]
通讯作者:
山下栄樹
Novel computational scheme for structural determination of multiple conformational segments of biological macromolecules employing crystallographic electron density data in low resolution regions
利用低分辨率区域晶体电子密度数据确定生物大分子多个构象片段结构的新计算方案
DOI:
--
发表时间:
2014
期刊:
影响因子:
--
作者:
[Kiyohito Kihira, Jiyoung Kang, Hiroshi Nishigami, Masaru Tateno, Tomitake Tsukihara]
通讯作者:
Tomitake Tsukihara
ウシ心筋チトクロム酸化酵素休止酸化型の高分解能 X 線結晶構造解析
牛心脏细胞色素氧化酶静息氧化形式的高分辨率 X 射线晶体结构分析
DOI:
--
发表时间:
2012
期刊:
影响因子:
--
作者:
[K. Kan, J. Yang, A. Ogata, T. Kondoh, M. Gohdo, I. Nozawa, T. Toigawa, K. Norizawa, H. Kobayashi, Y. Yoshida, 矢野直峰]
通讯作者:
矢野直峰
ヒト由来ギャップ結合チャネルの構造解析
人源间隙连接通道的结构分析
DOI:
--
发表时间:
2011
期刊:
生化学
影响因子:
--
作者:
[前田将司]
通讯作者:
前田将司
The mechanisms of self-assembly of the vault : the largest cytoplasmic ribonucleoprotein complex
穹窿自组装机制:最大的细胞质核糖核蛋白复合物
DOI:
--
发表时间:
2010
期刊:
影响因子:
--
作者:
[M. Arata, M. Sato, A. Yamashita and M. Yamamoto, 田中秀明]
通讯作者:
田中秀明
共 67 条
Crystal structural analysis of connexin-26 gap junction channel to elucidate functional mechanism of gap junction
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批准号:18207006
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项目类别:Grant-in-Aid for Scientific Research (A)
-
资助金额:$31.28万
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财政年份:2006
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负责人:TSUKIHARA Tomitake
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依托单位:
Functional Mechanism and Structural Organization of Biological Macromolecular Assemblies
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批准号:16087101
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$31.3万
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财政年份:2004
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负责人:TSUKIHARA Tomitake
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依托单位:
High resolution X-ray crystal structural analysis of biological macromolecular assemblies
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批准号:16087206
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$125.63万
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财政年份:2004
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负责人:TSUKIHARA Tomitake
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依托单位:
Crystal Structural Analysis of IL6/IL6 receptor Complex and Development of Functional Regulation of IL6 with cDNA
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批准号:13359003
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$31.78万
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财政年份:2001
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负责人:TSUKIHARA Tomitake
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依托单位:
X-ray crystallographic studies on molecular mechanism of Oxygen respriration
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批准号:08408026
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$20.29万
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财政年份:1996
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负责人:TSUKIHARA Tomitake
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依托单位:
Development of novel X-ray diffraction measurement for biological macromolecular assemblies
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批准号:06558102
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$12.1万
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财政年份:1994
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负责人:TSUKIHARA Tomitake
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依托单位:
Crystal Structure Analysis of Spherical Viruses
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批准号:03403025
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项目类别:Grant-in-Aid for General Scientific Research (A)
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资助金额:$15.42万
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财政年份:1991
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负责人:TSUKIHARA Tomitake
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依托单位:
X-Ray Crystal Structural Analysis of Tobacco Necrosis Virus at 5A Resolution
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批准号:01580053
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项目类别:Grant-in-Aid for General Scientific Research (C)
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资助金额:$1.54万
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财政年份:1989
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负责人:TSUKIHARA Tomitake
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依托单位:
Crystal structural Analysis of Ferredoxins Which Change the Structures of Active Center by Removing Iron Atom.
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批准号:59470133
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项目类别:Grant-in-Aid for General Scientific Research (B)
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资助金额:$3.65万
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财政年份:1984
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负责人:TSUKIHARA Tomitake
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依托单位:
海外基金