Morphological Profiling in Saccharomyces cerevisiae and Development of high-content imaging techniques
Morphological Profiling in Saccharomyces cerevisiae and Development of high-content imaging techniques
批准号:
21310127
负责人:
OHYA Yoshikazu
金额:
$11.07万
依托单位:
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
2009
资助国家:
日本
项目状态:
已结题
起止时间:
2009 至 2011
中文摘要
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英文摘要
Drug discovery are based on elucidation of the potential mechanisms of action and cellular targets of candidate chemical compounds. We developed high-content imaging techniques in Saccharomyces cerevisiae, allowing simultaneous analysis of morphological phenotypes regarding to cell shape, actin and nucleus. We proposed a novel strategy to identify drug targets by combining phenome database and high-content imaging in yeast. In this approach, we infer the cellular functions affected by candidate drugs by comparing morphologic profiles induced by the compounds with the phenotypes of yeast mutants. Using this method and four well-characterized reagents, we successfully identified previously known target genes of the compounds as well as other genes involved with functionally related cellular pathways. We also expanded our morphological analyses on other cellular structures. We succeeded to extract 1,111 parameters from digital images of 9 subcellular structures including cell shape, nuclear DNA, mitochondria, actin structures, spindle pole bodies, septin rings, the vacuole, the cis- and trans-Golgi. With advancements in our study, systematic and comprehensive morphological analyses will inevitably continue to progress.
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DOI:
10.1016/j.jbiosc.2011.08.010
发表时间:
2011-12
期刊:
Journal of bioscience and bioengineering
影响因子:
2.8
作者:
[D. Watanabe;Satoru Nogami;Y. Ohya;Y. Kanno;Yan Zhou;T. Akao;H. Shimoi]
通讯作者:
D. Watanabe;Satoru Nogami;Y. Ohya;Y. Kanno;Yan Zhou;T. Akao;H. Shimoi
Multidimensional quantification of subcelluar morphology of Saccharomyces cerevisiae using CalMorph
使用 CalMorph 对酿酒酵母亚细胞形态进行多维定量
DOI:
--
发表时间:
2009
期刊:
the high-throughput image-processing program Journal of Biotechnology
影响因子:
--
作者:
[Negishi T, Nogami S, Ohya Y]
通讯作者:
Ohya Y
野生Saccharomyces cerevisiaeの形態情報解析
野生酿酒酵母形态信息分析
DOI:
--
发表时间:
2009
期刊:
影响因子:
--
作者:
[Kimihiro Hino, Eigo Shimizu, Kumiko Ui-Tei, 里村雄彦, 野上識]
通讯作者:
野上識
細胞観察装置、細胞観察方法及びそ のプログラム
细胞观察装置、细胞观察方法及其程序
DOI:
--
发表时间:
2012
期刊:
影响因子:
--
作者:
[]
通讯作者:
Role of bottom-fermenting brewer's yeast KEX2 in high temperature resistance and poor proliferation at low temperatures
下发酵啤酒酵母KEX2在耐高温和低温增殖不良中的作用
DOI:
--
发表时间:
2010
期刊:
The Journal of General and Applied Microbiology
影响因子:
--
作者:
[Bhuyian, S. S., Kinoshita, S., Ceyhun, S., Asaduzzaman, Md., Asakawa, S., Watabe, S., Yamagishi H]
通讯作者:
Yamagishi H
共 24 条
Yeast Phenome analysis with super-hidimensional morphological profiling
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批准号:24370002
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项目类别:Grant-in-Aid for Scientific Research (B)
-
资助金额:$11.56万
-
财政年份:2012
-
负责人:OHYA Yoshikazu
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依托单位:
Cell Cycle Regulation of Cell Morphology in Saccharomyces cerevisiae
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批准号:19370074
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$11.98万
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财政年份:2007
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负责人:OHYA Yoshikazu
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依托单位:
Molecular Mechanism of Cell Wall Integrity Checkpoint
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批准号:17370060
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.28万
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财政年份:2005
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负责人:OHYA Yoshikazu
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依托单位:
Study of cell morphogenesis that is coupled with cell division cycle
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批准号:16026205
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$14.78万
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财政年份:2004
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负责人:OHYA Yoshikazu
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依托单位:
Multifunctional molecular switch essential for cell morphogenesis
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批准号:14380325
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$9.54万
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财政年份:2002
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负责人:OHYA Yoshikazu
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依托单位:
Multifunctional molecular switch essential for cell morphogenesis
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批准号:11480177
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.24万
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财政年份:1999
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负责人:OHYA Yoshikazu
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依托单位:
Homing directed by VDE endonuclease in Saccharomyces cerevisiae
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批准号:10216203
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项目类别:Grant-in-Aid for Scientific Research on Priority Areas
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资助金额:$23.94万
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财政年份:1998
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负责人:OHYA Yoshikazu
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依托单位:
Study of multifunctional signalling proteins implicated in cell proliferation
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批准号:08454241
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$5.7万
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财政年份:1996
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负责人:OHYA Yoshikazu
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依托单位:
海外基金