权益分类	功能权益	普通用户	{{item.name}}会员
{{category.name}}	{{benefitItem.name}}

Systems Technologies Core

系统技术核心

基本信息

批准号：
10162595
负责人：
David C. Muddiman
金额：
$ 8.27万
依托单位：
NORTH CAROLINA STATE UNIVERSITY RALEIGH
依托单位国家：
美国
项目类别：
财政年份：
2015
资助国家：
美国
起止时间：
2015-04-20 至 2025-03-31
项目状态：
未结题

来源：
https://reporter.nih.gov/project-details/10162595
关键词：
Address Area Bioinformatics Communities Computer software Consultations Core Facility Custom Data Data Analyses Data Science Data Storage and Retrieval Ensure Environment Environmental Exposure Environmental Health Environmental Impact Environmental Risk Factor Evaluation Experimental Designs Funding Genomics Health Health Sciences Human Human Resources In Vitro Informatics Integrative Medicine Knowledge Laboratories Link Management Information Systems Measurement Memory Metals Methodology Methods Mission Monitor Pathway interactions Performance Phase Population Study Procedures Proteomics Publications Quality Control Reaction Reporting Research Research Personnel Resources Sampling Schedule Scientist Services Solid Structure System Techniques Technology Toxic Environmental Substances Training Training and Education Translations Universities billing data cloud based cluster computing cohesion complement system cost data exchange data management data visualization design epigenomics in silico in vivo innovation instrumentation interest large datasets member metabolomics multidisciplinary multiple omics novel parallel computer programs quality assurance small molecule transcriptomics voucher web server web site

项目摘要

ABSTRACT- SYSTEMS TECNOLOGIES CORE The overall objective of the Systems Technologies Core (STC) is to provide expertise, state-of-the-art instrumentation and novel analytical approaches to address a broad range of scientific questions presented across the Center for Human Health and the Environment (CHHE) at NC State University. Expertise in analytical evaluations is greatly needed for the translation of the CHHE’s mission to understand how human health is impacted by environmental factors and implement this knowledge to reduce the adverse impact of environmental factors. The STC will provide CHHE investigators with analytical expertise and state-of-art methodologies to create an integrative, mechanistic picture of the underlying effects of environmental exposures on human health. These methodologies include 1) genomics, transcriptomics, and epigenomics; 2) discovery and targeted proteomics; 3) discovery and targeted metabolomics including environmental toxicants; and 4) metallomics including metal speciation. Each section of the STC will have an expert Navigator: Dr. Erin Baker - metabolomics/small molecules; Dr. David Baltzegar - genomics, epigenomics transcriptomics; Dr. Michael Bereman - proteomics; and Dr. Dean Hesterberg - metallomics to provide expertise, guidance, and consultation on experimental design for cutting-edge omics technologies. To accommodate the analytical needs of the CHHE membership, a partnership was formed with NC State’s Measurement, Education, Training and Research Innovation Center (METRIC) in September 2018 for proteomics, metabolomics, and metallomics services. CHHE Full members will have priority access to these facilities and services and will be eligible to participate in CHHE’s new STC Voucher Program which we will launch in the next funding cycle. Under this program, CHHE will provide 50% of the costs for STC services to Full members for projects with EHS relevance. STC is linked to NC State’s Bioinformatics Research Center (BRC) and all STC data are transferred and stored on BRC- and CHHE-supported servers. Data can be analyzed for investigators by the STC using dedicated software or by CHHE’s new Environmental Data Science Group within the IHSFC utilizing a dedicated, state-of-the-art parallel computing cluster that includes high-power compute nodes, high-memory nodes and web servers.

抽象系统技术核心系统技术核心(STC)的总体目标是提供专业知识、最先进的仪器和新的分析方法，以解决提出的广泛的科学问题在北卡罗来纳州州立大学人类健康与环境中心(CHHE)。以下领域的专业知识分析评估是非常需要的，以翻译车的使命，以了解人类如何健康受到环境因素的影响，并实施这一知识以减少环境因素。STC将为CHHE调查人员提供分析专业知识和最先进的技术创建环境潜在影响的综合、机械性图景的方法对人类健康的暴露。这些方法包括1)基因组学、转录组学和表观基因组学；2) 发现和靶向蛋白质组学；3)发现和靶向代谢组学，包括环境毒物；金属组学，包括金属形态。STC的每个部分都将有一名专家导航员：Erin博士贝克-代谢组学/小分子；David Baltzegar博士-基因组学，表观基因组学转录组； Michael Bereman-蛋白质组学；Dean Hester berg博士-金属组学，提供专业知识、指导和前沿组学技术实验设计咨询。以适应分析性的为了满足CHHE成员的需求，与NC国家测量、教育、培训部门建立了合作伙伴关系和研究创新中心(METIME)，2018年9月，针对蛋白质组学、代谢组学和金属组学服务。CHHE正式会员将优先使用这些设施和服务，并有资格参与CHE的新STC代金券计划，我们将在下一个资金周期推出该计划。在这下面计划，CHHE将为EHS项目的正式成员提供50%的STC服务成本关联性。STC链接到北卡罗来纳州的生物信息学研究中心(BRC)，所有STC数据都被传输并存储在BRC和CHHE支持的服务器上。STC可以使用以下工具为调查人员分析数据专用软件或由车的新的环境数据科学小组在IHSFC内使用专用、最先进的并行计算集群，包括高性能计算节点、高内存节点和Web服务器。