Proteomics & Genomics Hands-On Workshop: From Sample Preparation to Data Analysis

蛋白质组学

• 批准号: 7284295
• 负责人: Nichole A Reisdorph
• 金额: $ 14.21万
• 依托单位: UNIVERSITY OF COLORADO DENVER
• 依托单位国家: 美国
• 财政年份: 2006
• 资助国家: 美国
• 起止时间: 2006-09-05 至 2010-08-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/7284295
• 关键词: Access to Information; Address; Administrator; Advertising; American; Animal Model; Appendix; Applications Grants; Archives; Area; Arts; Base Sequence; Biochemistry; Bioethics; Bioinformatics; Biological; Biological Assay; Biological Sciences; Biology; Biomedical Research; Biometry; Biotin; Blood; Book Reviews; Calibration; Charge; Cheese; Class; Clinical; Clinical Nutrition; Cloning; Cluster Analysis; Coenzyme A; Collaborations; Collection; Colorado; Communication; Complementary DNA; Complex; Computer software; Congresses; Copyright; Core Facility; Daily; Data; Data Analyses; Data Set; Data Sources; Data Storage and Retrieval; Databases; Depth; Development; Digestion; Drug Monitoring; Education; Educational Curriculum; Educational Materials; Educational process of instructing; Educational workshop; Electrospray Ionization; Elements; Ensure; Epigenetic Process; Evaluation; Event; Evolution; Experimental Designs; Exposure to; Extensible Markup Language; Faculty; Feedback; Flowcharts; Fractionation; Functional RNA; Funding; Future; Gel; Gene Expression; Genes; Genetic Transcription; Genome; Genomics; Goals; Graduate Education; Grant; Guidelines; Hand; Hand functions; Health Sciences; Healthcare; Heart; Hematological Disease; High Pressure Liquid Chromatography; Hour; Human; Human Resources; Hybrids; Imagery; In Vitro; Individual; Industry; Institutes; Instruction; International; Internet; Investigation; Ions; Joints; Journals; Knowledge; Label; Laboratories; Language; Lead; Learning; Letters; Life; Link; Literature; Lung; Mails; Manuals; Manufacturer Name; Maps; Marketing; Mass Spectrum Analysis; Measurement; Measures; Mediation; Metadata; Methods; MicroRNAs; Microarray Analysis; Modeling; Molecular Biology; Molecular Biology Techniques; Monitor; Nature; Newsletter; Northern Blotting; Nucleic Acids; Nucleotides; Numbers; Nutritional Study; Online Systems; Ontology; Orthologous Gene; Outcome; Output; Pamphlets; Participant; Pattern; Peptides; Performance; Phosphopeptides; Phosphoproteins; Polymerase Chain Reaction; Postdoctoral Fellow; Preparation; Principal Investigator; Procedures; Process; Program Evaluation; Property; Proteins; Proteome; Proteomics; Protocols documentation; Provider; Publications; Published Comment; Purpose; Questionnaires; RNA; RNA Sequence Analysis; Randomized; Reaction; Recruitment Activity; Research; Research Design; Research Personnel; Resolution; Resources; Reverse Transcriptase Polymerase Chain Reaction; Review Committee; Review Literature; Role; Rotation; Running; Sales; Sample Size; Sampling; San Francisco; Schedule; Scholarship; Science; Scientist; Score; Sequence Analysis; Services; Site; Sleep Disorders; Small Interfering RNA; Societies; Solutions; Source; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Spottings; Staining method; Stains; Standardization; Structure; Students; Surveys; System; Systems Biology; Teaching Method; Techniques; Technology; Telephone; Testing; Therapeutic; Time; Toxicology; Trainers Training; Training; Training Activity; Training Programs; Travel; Two-Dimensional Gel Electrophoresis; Unified Medical Language System; United States National Institutes of Health; Universities; Update; Validation; Vendor; Videotape; Vision; Visit; Voting; Week; Wine; Work; Writing; abstracting; analytical method; base; comparative; concept; cost; day; design; detector; experience; follow-up; high school; indexing; instructor; instrument; instrumentation; interest; investigator training; journal article; lecturer; lectures; liquid chromatography mass spectrometry; mass spectrometer; member; nano; novel; novel strategies; nucleic acid purification; outreach program; performing art; posters; preference; programs; protein structure; protein structure prediction; research study; response; sample collection; skills; social group; statistics; success; symposium; theories; three dimensional structure; tool; wiki

DESCRIPTION (provided by applicant): In recent years, genomics and proteomics have emerged as key technologies in biomedical research, resulting in a surge of interest in training by investigators keen to utilize these technologies in their research. Use of these advanced technologies requires trained personnel in order to produce valuable results, quality publications, and superior grant applications. To be of maximum benefit, education should ideally occur before experiments are begun, in order to lessen the possibility that the wrong platform is chosen. For example, a first step toward integrating "omics" technologies is the development of a well-stated hypothesis which clearly defines the research question under investigation. In order to test the hypothesis, the researcher must choose which platform to utilize and this requires an understanding of the technology available and the strengths and weaknesses of each approach. Alternatively, an investigator may determine that a combination of genomics and proteomics approaches is necessary. Careful experimental design is then critical to the success of the project as well as for interpreting the results. Given the large datasets generated by these technologies, knowledge of biostatistics, data analysis, and bioinformatics are vital and these are areas in which many investigators require additional training, specifically in the context of "omics" research. To address the issues outlined above, at least two types of training in "omics" technologies can be envisioned: 1) immediate, short-term training in the form of workshops, and 2) long-term, comprehensive instruction in the form of graduate education programs. The current proposal aims to fill the former need by providing hands-on training in genomics and proteomics in a coherent, experimentally-based framework. The Directors of the proposal have developed and taught courses covering Proteomics, Genomics, Bioinformatics, and Biostatistics and the curriculum for the proposed course will merge their expertise to provide a comprehensive training overview of these key technologies. Specifically, we propose to accomplish the following: build a curriculum enabling outcome-structured learning in proteomics and genomics technologies, provide novel training experiences using hands-on techniques and an established model by experienced investigators and educators, disseminate educational materials such that knowledge and information can be used to benefit a wide variety of audiences, and provide and/or act as portal for collaborative opportunities for both young and established investigators. (End of Abstract)

描述（由申请人提供）： 近年来，基因组学和蛋白质组学已成为生物医学研究的关键技术， 这导致热衷于在研究中利用这些技术的调查人员对培训的兴趣激增。使用这些先进技术需要训练有素的人员，以产生有价值的结果，高质量的出版物，和上级赠款申请。为了获得最大效益，教育最好在实验开始之前进行，以减少选择错误平台的可能性。例如，整合“组学”技术的第一步是发展一个明确的假设，明确定义正在调查的研究问题。为了检验假设，研究人员必须选择使用哪种平台，这需要了解可用的技术以及每种方法的优缺点。或者，研究人员可能会确定基因组学和蛋白质组学方法的组合是必要的。仔细的实验设计对项目的成功以及对结果的解释至关重要。鉴于这些技术产生的大型数据集，生物统计学，数据分析和生物信息学的知识是至关重要的，这些是许多研究人员需要额外培训的领域，特别是在“组学”研究的背景下。为了解决上述问题，至少可以提供两种类型的“组学”技术培训。 设想：1）以讲习班形式进行的即时短期培训，以及2）以研究生教育计划形式进行的长期全面指导。目前的建议旨在通过在一个连贯的、以实验为基础的框架内提供基因组学和蛋白质组学方面的实践培训来满足前一种需求。该提案的董事已经开发和教授了涵盖蛋白质组学，基因组学，生物信息学和生物统计学的课程，拟议课程的课程将融合他们的专业知识，以提供这些关键技术的全面培训概述。具体而言，我们建议实现以下目标：建立一个能够在蛋白质组学和基因组学技术方面进行成果结构化学习的课程，由经验丰富的调查人员和教育工作者利用实践技术和既定模式提供新的培训经验，传播教育材料，使知识和信息能够用于造福于各种各样的受众，并为年轻和成熟的调查人员提供和/或充当合作机会的门户。 (End摘要）