Graduate Training in Computational and Systems Biology
Graduate Training in Computational and Systems Biology
批准号:
10681214
负责人:
CHRISTOPHER B BURGE
金额:
$53.05万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-07-01 至 2024-06-30
中文摘要
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英文摘要
Project Summary
The objective is to support a Computational Systems Biology training program (CSBTP) to train students to
become leaders in biomedical research at the interface of biology, computation and engineering. The effort is
centered in MIT's interdisciplinary predoctoral training program in Computational and Systems Biology (CSB),
which is the primary training program at MIT for students interested in computational and systems biology and
is the only program that emphasizes interdisciplinary training and research in the field. Program faculty are
concentrated in the three founding departments – Biological Engineering (BE), Biology, and Electrical
Engineering & Computer Science (EECS) – with additional involvement of faculty from other departments.
Research interests of training faculty span a wide range of CSB-related areas, including Regulatory Genomics
and Proteomics, Precision Medicine and Medical Genomics, Molecular Biophysics and Structural Biology,
Biological Networks and Machine Learning, and Cancer Systems Biology. This proposal seeks to expand the
pool of training faculty significantly, including 7 faculty newly hired in the past 5 years who have active research
programs in the field. Students apply directly to the CSB Ph.D. program from their undergraduate or Master’s
institution and receive multi- and inter-disciplinary training in the field of computational and systems biology.
The proposal seeks funding for 10 predoctoral traineeships per year, enabling extended research rotations and
participation in special program activities. Unique aspects of the program include: (a) unusually diverse
collection of research areas across science and engineering, with highly collaborative interdisciplinary faculty;
(b) a unique core of interdisciplinary classroom subjects that combine biology, engineering, statistics and
computation; (c) intensive advising and multi-disciplinary thesis committees to optimize the training experience
for students from diverse academic backgrounds; (d) an annual retreat with participation of students and
faculty focusing on research, careers, and challenges to interdisciplinary research.
期刊论文(100)
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科研奖励(0)
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DOI:
10.1016/j.crmeth.2022.100254
发表时间:
2022-07-18
期刊:
Cell reports methods
影响因子:
--
作者:
[]
通讯作者:
DOI:
10.1101/gr.184390.114
发表时间:
2015-06
期刊:
Genome research
影响因子:
7
作者:
[Wang ET, Ward AJ, Cherone JM, Giudice J, Wang TT, Treacy DJ, Lambert NJ, Freese P, Saxena T, Cooper TA, Burge CB]
通讯作者:
Burge CB
DOI:
10.1371/journal.pcbi.1008605
发表时间:
2021-01
期刊:
PLoS computational biology
影响因子:
4.3
作者:
[Louie W, Shen MW, Tahiry Z, Zhang S, Worstell D, Cassa CA, Sherwood RI, Gifford DK]
通讯作者:
Gifford DK
DOI:
10.1186/s13059-015-0853-4
发表时间:
2015-12-22
期刊:
Genome biology
影响因子:
12.3
作者:
[Sudmant PH, Alexis MS, Burge CB]
通讯作者:
Burge CB
DOI:
10.1016/j.cub.2019.03.047
发表时间:
2019-05-06
期刊:
CURRENT BIOLOGY
影响因子:
9.2
作者:
[Enke, Tim N., Datta, Manoshi S., Cordero, Otto X.]
通讯作者:
Cordero, Otto X.
共 59 条
Regulation and Function of Alternative mRNA Isoform Expression in Mammals
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批准号:10540339
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项目类别:
-
资助金额:$52.87万
-
财政年份:2021
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Regulation and Function of Alternative mRNA Isoform Expression in Mammals
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批准号:10323056
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项目类别:
-
资助金额:$51.87万
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财政年份:2021
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负责人:CHRISTOPHER B BURGE
-
依托单位:
RNA-Binding Proteins as Molecular Integrators that Control the Response of HGSOC to Ant-Cancer Therapies
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批准号:10524771
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项目类别:
-
资助金额:$52.58万
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财政年份:2018
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负责人:CHRISTOPHER B BURGE
-
依托单位:
RNA-Binding Proteins as Molecular Integrators that Control the Response of HGSOC to Ant-Cancer Therapies
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批准号:10054974
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项目类别:
-
资助金额:$53.65万
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财政年份:2018
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负责人:CHRISTOPHER B BURGE
-
依托单位:
RNA-Binding Proteins as Molecular Integrators that Control the Response of HGSOC to Ant-Cancer Therapies
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批准号:10305607
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项目类别:
-
资助金额:$53.65万
-
财政年份:2018
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Bioinformatics
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批准号:9149750
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项目类别:
-
资助金额:$38.16万
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财政年份:2015
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负责人:CHRISTOPHER B BURGE
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依托单位:
Dynamics of Gene and Isoform Regulation during EMT and tumor progression
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批准号:8684871
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项目类别:
-
资助金额:$71.38万
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财政年份:2014
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负责人:CHRISTOPHER B BURGE
-
依托单位:
Dynamics of Gene and Isoform Regulation during EMT and tumor progression
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批准号:8852097
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项目类别:
-
资助金额:$69.39万
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财政年份:2014
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负责人:CHRISTOPHER B BURGE
-
依托单位:
Development of technologies for genome-wide identification of RNA branch points
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批准号:8310598
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项目类别:
-
资助金额:$26.81万
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财政年份:2012
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负责人:CHRISTOPHER B BURGE
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依托单位:
Development of technologies for genome-wide identification of RNA branch points
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批准号:8628858
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项目类别:
-
资助金额:$26.15万
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财政年份:2012
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Development of technologies for genome-wide identification of RNA branch points
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批准号:8463015
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项目类别:
-
资助金额:$25.54万
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财政年份:2012
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负责人:CHRISTOPHER B BURGE
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依托单位:
Computational and Experimental Analysis of Vertebrate RNA Splicing
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批准号:8097067
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项目类别:
-
资助金额:$49.91万
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财政年份:2010
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
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批准号:8278517
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项目类别:
-
资助金额:$22.33万
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财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
-
批准号:10200074
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项目类别:
-
资助金额:$48.76万
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财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
-
批准号:8883565
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项目类别:
-
资助金额:$27.37万
-
财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
-
批准号:7884445
-
项目类别:
-
资助金额:$13.12万
-
财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
-
批准号:8102712
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项目类别:
-
资助金额:$22.09万
-
财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
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批准号:8500362
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项目类别:
-
资助金额:$19.37万
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财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
Graduate Training in Computational and Systems Biology
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批准号:8741197
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项目类别:
-
资助金额:$27.08万
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财政年份:2009
-
负责人:CHRISTOPHER B BURGE
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依托单位:
Deep Sequencing Analysis of mRNA Isoform Expression Changes in Myotonic Dystrophy
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批准号:7943876
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项目类别:
-
资助金额:$143.99万
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财政年份:2009
-
负责人:CHRISTOPHER B BURGE
-
依托单位:
海外基金