Core B: Data Management and Analysis Core
Core B: Data Management and Analysis Core
批准号:
10688012
负责人:
Stuart S Levine
金额:
$25.15万
依托单位国家:
美国
项目类别:
财政年份:
2017
资助国家:
美国
项目状态:
未结题
起止时间:
2017-09-01 至 2027-06-30
关键词:
Animal ModelBiologicalBiomedical ResearchCancer EtiologyCarcinogensChemicalsCollaborationsCommunitiesComputer ModelsDNA DamageDataData AnalysesData Management ResourcesData SetDimethylnitrosamineDisciplineDiseaseEnsureEnvironmental Engineering technologyEnvironmental ScienceFAIR principlesFamilyFosteringGoalsHazardous ChemicalsHazardous SubstancesHealthHumanInfrastructureInterventionKnowledgeLearningMethodsMissionMolecularMultiomic DataMunicipalitiesMutagensN-nitrosodimethylamineNational Institute of Environmental Health SciencesNitrosaminesNitroso CompoundsPathway interactionsPersonsPrevention strategyPrivatizationProbabilityPublic HealthQuality ControlRegulationResearchResearch PersonnelResearch Project GrantsRestRiskScienceScientistSuperfundSystemTechniquesTechnologyTimeTrainingTranslational ResearchTribesUpdateVisionWaterWorkanalytical methodbiomarker developmentcarcinogenicitycommunity engagementcomputerized toolscontaminated drinking waterdata hubdata integrationdata interoperabilitydata managementdata qualitydata sharingdata streamsdata submissiondiverse dataenvironmental chemicalimprovedknowledge integrationmathematical modelmeetingsmembermultiple omicsnovelphenotypic datapreventprogramsquality assuranceremediationsensorsuccesssuperfund chemicalsuperfund sitetimelinetribal organizationwater samplingwater treatment
中文摘要
项目摘要/摘要-数据管理和分析核心
N-亚硝胺是一类化学物质,其中包括一些已知的最强的诱变剂。许多N-
亚硝胺已经在动物模型中被证明具有潜在的致癌作用,一些已经被认为是
可能是人类致癌物质。N-亚硝胺是居住在Olin化学公司附近的人的主要担忧
超级基金网站,因为在附近的市政和私人油井中发现了N-亚硝基二甲胺(NDMA)。
NDMA也是PassamAquoddy部落的一个关切,因为用于水处理的方法是已知的
导致NDMA的形成。生物医学研究(BMR)项目将揭示N-N对健康的影响。
亚硝胺,以预测和预防疾病,以及环境科学和工程(ESE)
项目将创造技术来感知和摧毁N-亚硝胺,以保护人们免受这些
危险化学品。麻省理工学院SRP数据管理和分析核心(DMAC)的任务是建立和
改进数据管理,促进和支持跨学科协作,并利用计算
建模以获取新知识。具体目标1是继续改进麻省理工学院-Seek数据管理
并创建并持续改进综合数据管理计划。这些努力将
确保麻省理工学院SRP数据可查找、可访问、可互操作和可重复使用(公平)。具体目标2是
促进项目和核心之间的跨学科协作和数据集成,并分享最佳做法
以获得更广泛的影响。具体目标3是利用计算建模技术来揭示
对疾病的机械性理解,并提供有关风险的重要信息。重要的是,少校
麻省理工学院SRP的目标是通过相互作用和相互依赖的系统方法实现的
在所有项目和核心中。DMAC对于系统方法是必不可少的,因为它统一了团队
专注于所有组件的数据和结果,从而促进有效的协作。不断更新
还提供了敏捷性,因为研究人员可以在协作机会实时出现时抓住它们。
重要的是,DMAC还带来了先进的计算建模技术,因此数据流可以
在整个项目中合并。整合关于水中N-亚硝胺含量、位置和数量的知识
对其生物学效应的新认识将有助于理解风险并进行预防
战略。所有的研究都是由受训者实现的,他们的成功取决于研究翻译和
协调核心(RETCC)。传感器和分析方法的结果将由DMAC分析,以及
社区参与核心将使这些成为可能,该核心将与社区成员合作
获取水样。最后,通过会议和丰富活动,行政核心支持
DMAC在计划内的连接性方面,以及通过与地方、州和国家以及
部落组织。通过“团队科学”,一种培育合作的价值体系,DMAC将
推动麻省理工学院SRP保护人们免受危险环境化学品伤害的使命。
英文摘要
PROJECT SUMMARY/ABSTRACT – DATA MANAGEMENT AND ANALYSIS CORE
N-Nitrosamines are a family of chemicals that include some of the most potent mutagens known. Many N-
nitrosamines have been shown to be potently carcinogenic in animal models, and some have been deemed
probably human carcinogens. N-Nitrosamines are a major concern for people who live near the Olin Chemical
Superfund Site, because N-nitrosodimethylamine (NDMA) has been found in nearby municipal and private wells.
NDMA is also a concern of the Passamaquoddy Tribe, because the methods used for water treatment are known
to lead to formation of NDMA. The Biomedical Research (BMR) Projects will reveal the health effects of N-
nitrosamines, so as to predict and prevent disease, and the Environmental Science and Engineering (ESE)
Projects will create technology to sense and destroy N-nitrosamines, so as to protect people from these
hazardous chemicals. The mission of the MIT SRP Data Management and Analysis Core (DMAC) is to build and
improve data management, to foster and enable cross-disciplinary collaborations, and to leverage computational
modeling to gain new knowledge. Specific Aim 1 is to continue to improve the MIT-SEEK data management
platform and to create and continuously improve a Comprehensive Data Management Plan. These efforts will
ensure that MIT SRP data are findable, accessible, interoperable, and reusable (FAIR). Specific Aim 2 is to
foster cross-disciplinary collaboration and data integration among Projects and Cores and to share best practices
for a broader impact. Specific Aim 3 is to leverage computational modeling techniques in order to reveal
mechanistic understanding of disease and provide important information about risk. Importantly, the major
goals of the MIT SRP are made possible by a Systems Approach of interactions and interdependencies
among all Projects and Cores. The DMAC is essential to the Systems Approach, because it unifies the team
to focus on data and results from all components, so that effective collaboration is fostered. Constant updating
also provides agility, since researchers can embrace collaborative opportunities as they arise in real time.
Importantly, the DMAC also brings advanced computational modeling techniques so that data streams can be
merged across the program. Integrating knowledge of what, where, and how much N-nitrosamines are in water
with new knowledge of their biological effects will contribute to the understanding of risk and enable prevention
strategies. All research is made possible by Trainees, and their success rests on the Research Translation and
Coordination Core (RETCC). Results from sensors and analytical methods will analyzed by the DMAC, and
these will be made possible by the Community Engagement Core, which will work with community members to
obtain water samples. Finally, through meetings and enrichment activities, the Administrative Core supports the
DMAC both in terms of connectivity within the program, and via interactions with local, state, and national and
tribal organizations. Through “Team Science,” a system of values that nurture collaborations, the DMAC will
propel the MIT SRP's mission to protect people from hazardous environmental chemicals.
期刊论文(0)
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会议论文
Expanding access to Genomics Methods through Modern Focused Ultrasonication
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批准号:10735363
-
项目类别:
-
资助金额:$12.88万
-
财政年份:2023
-
负责人:Stuart S Levine
-
依托单位:
Core B: Data Management and Analysis Core
-
批准号:10351937
-
项目类别:
-
资助金额:$25.09万
-
财政年份:2017
-
负责人:Stuart S Levine
-
依托单位:
Genomics Facilities Core
-
批准号:8375050
-
项目类别:
-
资助金额:$25.16万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
Genomics Facilities Core
-
批准号:8830354
-
项目类别:
-
资助金额:$24.63万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
Genomics Facilities Core
-
批准号:8466330
-
项目类别:
-
资助金额:$24.41万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
Genomics Facilities Core
-
批准号:8650837
-
项目类别:
-
资助金额:$24.05万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
Genomics and Imaging Facilities Core
-
批准号:9913528
-
项目类别:
-
资助金额:$17.46万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
Genomics Facilities Core
-
批准号:8249298
-
项目类别:
-
资助金额:$23.03万
-
财政年份:--
-
负责人:Stuart S Levine
-
依托单位:
海外基金