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SUMMARY p53 is arguably one of the most important tumor suppressor proteins in humans. In almost 50% of all human cancers, p53 is found to be nonfunctional mostly due to single point mutations. The primary goals of this proposal are to gain a detailed understanding of the effect of most-frequent p53 cancer mutations on the protein structure and dynamics, and to leverage a novel computational methodology that identifies small molecules able to reactivate destabilized p53 cancer mutants—a method that represents a promising new approach to drug discovery. We aim to extend our understanding of the structural dynamics of truncated and full-length p53 with state- of-the-art molecular dynamics simulations in order to discovery novel druggable pockets that have not yet been experimentally characterized. Subsequently we plan to use this new structural information to identify small molecules with novel mechanisms of action and reveal new potential therapeutic avenues targeting this vital transcription factor.
期刊论文(7)
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DOI: 10.1021/acs.jctc.2c00282
发表时间: 2023-01
期刊: Journal of chemical theory and computation
影响因子: 5.5
作者: [Anupam Anand Ojha;Saumya Thakur;Surl-Hee Ahn;Rommie E. Amaro]
通讯作者: Anupam Anand Ojha;Saumya Thakur;Surl-Hee Ahn;Rommie E. Amaro
DOI: 10.1016/j.bpj.2021.01.037
发表时间: 2021-03-16
期刊: Biophysical journal
影响因子: 3.4
作者: [Oliveira ASF, Ibarra AA, Bermudez I, Casalino L, Gaieb Z, Shoemark DK, Gallagher T, Sessions RB, Amaro RE, Mulholland AJ]
通讯作者: Mulholland AJ
An integrated view of p53 dynamics, function, and reactivation.
p53 动态、功能和重新激活的综合视图。
DOI: 10.1016/j.sbi.2020.11.005
发表时间: 2021-04
期刊: Current opinion in structural biology
影响因子: 6.8
作者: [Demir Ö, Barros EP, Offutt TL, Rosenfeld M, Amaro RE]
通讯作者: Amaro RE
DOI: 10.1039/d3sc04195f
发表时间: 2023-11-22
期刊: Chemical science
影响因子: 8.4
作者: [Ojha AA, Votapka LW, Amaro RE]
通讯作者: Amaro RE
Multiscale Computational Microscopy of HIV-1
Core D: Structural and Computational Virology
  • 批准号:
    10522808
  • 项目类别:
  • 资助金额:
    $727.13万
  • 财政年份:
    2022
  • 负责人:
    Rommie E Amaro
  • 依托单位:
CORE C
CORE C
  • 批准号:
    10225395
  • 项目类别:
  • 资助金额:
    $25.83万
  • 财政年份:
    2019
  • 负责人:
    Rommie E Amaro
  • 依托单位:
国内基金
海外基金
帽结合蛋白(cap binding protein)调控乙烯信号转导的分子机制
  • 批准号:
    32170319
  • 项目类别:
    面上项目
  • 资助金额:
    58.00万元
  • 批准年份:
    2021
  • 负责人:
    董春海
  • 依托单位:
帽结合蛋白(cap binding protein)调控乙烯信号转导的分子机制
  • 批准号:
    --
  • 项目类别:
    --
  • 资助金额:
    58万元
  • 批准年份:
    2021
  • 负责人:
    董春海
  • 依托单位:
ID1 (Inhibitor of DNA binding 1) 在口蹄疫病毒感染中作用机制的研究
番茄EIN3-binding F-box蛋白2超表达诱导单性结实和果实成熟异常的机制研究
  • 批准号:
    31372080
  • 项目类别:
    面上项目
  • 资助金额:
    80.0万元
  • 批准年份:
    2013
  • 负责人:
    杨迎伍
  • 依托单位: