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Accurate and efficient software tools for de novo assembly of long, error-rich DNA sequence reads using spaced seeds and local de Bruijn graphs

Accurate and efficient software tools for de novo assembly of long, error-rich DNA sequence reads using spaced seeds and local de Bruijn graphs
准确高效的软件工具,可使用间隔种子和局部 de Bruijn 图从头组装长且富含错误的 DNA 序列读数
批准号:
490417-2016
负责人:
Chu, Justin
金额:
$2.55万
依托单位国家:
加拿大
项目类别:
Alexander Graham Bell Canada Graduate Scholarships - Doctoral
财政年份:
2018
资助国家:
加拿大
项目状态:
已结题
起止时间:
2018-01-01 至 2019-12-31

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中文摘要
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英文摘要
De Novo Assembly, Oxford Nanopore De Novo Assembly, Local Positional de Bruijn Graphs, Overlap Detection, Overlap Layout Consensus Assembly, Sequence Phasing, Spaced Seeds, Repeat Sequence Detection Algorithms, Consensus Calling, Bloom Filters
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Improving the representation of microbial reference genomes using pangenome reference sequence graphs - Methods for efficient construction and representation of pangenome graphs for microbial data
  • 批准号:
    557997-2021
  • 项目类别:
    Postdoctoral Fellowships
  • 资助金额:
    $1.64万
  • 财政年份:
    2021
  • 负责人:
    Chu, Justin
  • 依托单位:
Improving the representation of microbial reference genomes using pangenome reference sequence graphs - Methods for efficient construction and representation of pangenome graphs for microbial data
  • 批准号:
    557997-2021
  • 项目类别:
    Postdoctoral Fellowships
  • 资助金额:
    $1.64万
  • 财政年份:
    2020
  • 负责人:
    Chu, Justin
  • 依托单位:
Accurate and efficient software tools for de novo assembly of long, error-rich DNA sequence reads using spaced seeds and local de Bruijn graphs
  • 批准号:
    490417-2016
  • 项目类别:
    Alexander Graham Bell Canada Graduate Scholarships - Doctoral
  • 资助金额:
    $2.55万
  • 财政年份:
    2017
  • 负责人:
    Chu, Justin
  • 依托单位:
Accurate and efficient software tools for de novo assembly of long, error-rich DNA sequence reads using spaced seeds and local de Bruijn graphs
  • 批准号:
    490417-2016
  • 项目类别:
    Alexander Graham Bell Canada Graduate Scholarships - Doctoral
  • 资助金额:
    $2.55万
  • 财政年份:
    2016
  • 负责人:
    Chu, Justin
  • 依托单位:
国内基金
海外基金
固定参数可解算法在平面图问题的应用以及和整数线性规划的关系
  • 批准号:
    60973026
  • 项目类别:
    面上项目
  • 资助金额:
    32.0万元
  • 批准年份:
    2009
  • 负责人:
    鲁道夫
  • 依托单位: