The studies on organization and evolution of eukaiyotes based on genome analyses of primitive red alga.
The studies on organization and evolution of eukaiyotes based on genome analyses of primitive red alga.
批准号:
13206011
负责人:
KUROIWA Tsuneyoshi
金额:
$62.4万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research on Priority Areas
财政年份:
2001
资助国家:
日本
项目状态:
已结题
起止时间:
2001 至 2004
中文摘要
超小型单细胞藻类的小而紧凑的基因组提供了支持光合作用真核生物(包括高等植物)生命的基本和必需基因的信息。本文报道了单细胞红藻merolae 10D 20条染色体的16,520,305个碱基对序列,这是第一个完整的藻类基因组。我们共鉴定出5331个基因,其中至少86.3%表达。这种基因组结构的独特特征包括:除了26个基因外,其余基因都缺乏内含子;维持核仁的核糖体DNA单位只有三个拷贝;两个动力蛋白基因只参与线粒体和质体的分裂。卡尔文循环酶在红藻和绿色植物中保守的马赛克起源支持了单一原生质体内共生存在的假设。肌凝蛋白基因的缺失,加上未表达的肌动蛋白基因,表明细胞分裂的系统更简单。这些结果表明,merolae基因组为研究真核细胞的起源、进化和基本机制提供了一个具有简单基因组成的模式系统。
英文摘要
Small, compact genomes of ultrasmall unicellular algae provide information on the basic and essential genes that support the lives of photosynthetic eukaryotes, including higher plants. We reported the 16,520,305-base-pair sequence of the 20 chromosomes of the unicellular red alga Cyanidioschyzon merolae 10D as the first complete algal genome. We identified 5,331 genes in total, of which at least 86.3% were expressed. Unique characteristics of this genomic structure include: a lack of introns in all but 26 genes; only three copies of ribosomal DNA units that maintain the nucleolus; and two dynamin genes that are involved only in the division of mitochondria and plastids. The conserved mosaic origin of Calvin cycle enzymes in this red alga and in green plants supports the hypothesis of the existence of single primary plastid endosymbiosis. The lack of a myosin gene, in addition to the unexpressed actin gene, suggests a simpler system of cytokinesis. These results indicate that the C. merolae genome provides a model system with a simple gene composition for studying the origin, evolution and fundamental mechanisms of eukaryotic cells.
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Miyagishima et al.: "An evolutionary puzzle : chloroplast and mitochondrial division rings"Trends in Plant Sci.. 8. 432-438 (2003)
Miyagishima 等人:“进化之谜:叶绿体和线粒体分裂环”植物科学趋势.. 8. 432-438 (2003)
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通讯作者:
Kobayashi, T., Takahara, M., et al.: "Detection and localization of a chloroplast-encoded HU-like protein that may organize chloroplast nucleoids"Plant Cell. 14. 1579-1589 (2002)
Kobayashi, T.、Takahara, M. 等人:“检测和定位可能组织叶绿体核的叶绿体编码的 HU 样蛋白”Plant Cell。
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DOI:
10.1007/s00239-002-2419-9
发表时间:
2003-04-01
期刊:
JOURNAL OF MOLECULAR EVOLUTION
影响因子:
3.9
作者:
[Nozaki, H, Matsuzaki, M, Kuroiwa, T]
通讯作者:
Kuroiwa, T
Two types of FtsZ proteins in mitochondria and red-lineage chloroplasts : the duplication of FtsZ is implicated in endosynmbiosis.
线粒体和红系叶绿体中的两种类型的 FtsZ 蛋白:FtsZ 的重复与内共生有关。
DOI:
--
发表时间:
2004
期刊:
J.Mol.Evol. 58
影响因子:
--
作者:
[H.Shiozawa 他17名, Miyagishima et al.]
通讯作者:
Miyagishima et al.
Matsuzaki et al.: "Genome sequence of the ultra-small unicellular red alga Cyanidioschyzon merolae 10"Nature. (In press). (2004)
Matsuzaki 等人:“超小型单细胞红藻 Cyanidioschyzon merolae 10 的基因组序列”Nature。
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共 38 条
Elucidating the basis of plant cells based on the organelle division mechanism of microalgae
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批准号:19H03260
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.9万
-
财政年份:2019
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负责人:KUROIWA Tsuneyoshi
-
依托单位:
Genome-morphological elucidation of structure and function of intracellular 3 organelle division machinery
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批准号:16H04813
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.15万
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财政年份:2016
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Comprehensive understanding of organelle division and multiplication on bases of elucidation of dividing machinery of microbody
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批准号:25650101
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项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.58万
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财政年份:2013
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Reveal the mechanism of eukaryotic cell-on the base of genome information of mitochondrial division apparatus
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批准号:22657061
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项目类别:Grant-in-Aid for Challenging Exploratory Research
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资助金额:$2.16万
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财政年份:2010
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on total regulation system of plastid and mitochondrial division machineries
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批准号:22247007
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$28.54万
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财政年份:2010
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on molecular physiological mechanism of plastid and mitochondrial division machineries
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批准号:19207004
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$32.61万
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财政年份:2007
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on structure and function of organelles dividing machines based on genome information
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批准号:14204078
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项目类别:Grant-in-Aid for Scientific Research (A)
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资助金额:$36.52万
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财政年份:2002
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负责人:KUROIWA Tsuneyoshi
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依托单位:
A study of identification of the proteins and their genes which compose the dividing apparatus of mitochondria and plastids
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批准号:12440222
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.82万
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财政年份:2000
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负责人:KUROIWA Tsuneyoshi
-
依托单位:
CELL PHISIOLOGICAL AND MOLECULAR BIOLOGICA STUDIES ON THE DIVIDING APPARATUS OF PLASTIDS AND MITOCHONDRIA
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批准号:10440236
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.37万
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财政年份:1998
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on dynamic changes of molecular distribution in plant cells by immuno-electron microscopy
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批准号:02304007
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项目类别:Grant-in-Aid for Co-operative Research (A)
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资助金额:$13.25万
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财政年份:1990
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on the plastid-dividing apparatus by immuno-electron microscopy
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批准号:63440003
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项目类别:Grant-in-Aid for General Scientific Research (A)
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资助金额:$19.2万
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财政年份:1988
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Studies on control mechanisms of multiplication of cells and cellular organelles
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批准号:63110001
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项目类别:Grant-in-Aid for Special Project Research
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资助金额:$20.03万
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财政年份:1986
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负责人:KUROIWA Tsuneyoshi
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依托单位:
Analysis of mechanisms of maternal inheritance using laser fluorescence fluorimetory
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批准号:59440002
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项目类别:Grant-in-Aid for General Scientific Research (A)
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资助金额:$24.0万
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财政年份:1984
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负责人:KUROIWA Tsuneyoshi
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依托单位:
海外基金