San Diego Biomedical Informatics Education & Research (SABER)

圣地亚哥生物医学信息学教育

• 批准号: 10406030
• 负责人: SHAMIM NEMATI
• 金额: $ 44.64万
• 依托单位: UNIVERSITY OF CALIFORNIA, SAN DIEGO
• 依托单位国家: 美国
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-07-01 至 2027-06-30
• 项目状态: 未结题
• 来源: https://reporter.nih.gov/project-details/10406030
• 关键词: Academia; Area; Award; Bioinformatics; California; Cells; Clinical Research; Cognitive Science; Cultural Backgrounds; Degree program; Educational Background; Educational Curriculum; Enrollment; Faculty; Foundations; Grant; Health; Healthcare; Industry; Informatics; Institution; Journals; Medical center; Nonprofit Organizations; Positioning Attribute; Postdoctoral Fellow; Productivity; Publications; Research; Research Methodology; Research Project Grants; Research Training; Science; Systems Biology; Training; Training Programs; Training and Education; Underrepresented Minority; United States National Library of Medicine; Universities; Vision; Woman; biomedical informatics; computer science; education research; informatics training; innovation; learning strategy; meetings; pre-doctoral; professor; programs; symposium

Abstract The San Diego Biomedical Informatics Education & Research (SABER) training program was awarded an NLM training grant in the summer of 2012 and renewed in 2017. In this renewal proposal, we describe our accomplishments for the past 8.75 years and our vision for the next five years. The SABER training program includes core faculty from the University of California San Diego (UCSD) Health Department of Biomedical Informatics, as well as multiple faculty across UCSD. Since the start of this program in 2012, we have hosted 78 long- and short-term trainees. Our pre-doctoral trainees enroll in competitive doctoral programs in Bioinformatics and Systems Biology (BISB), Computer Science, Cognitive Science, or Biomedical Sciences. Trainees complete a foundational curriculum in biomedical informatics (BMI), taught by our core faculty, in addition to core curricula from their respective degree programs. All of our trainees have been meeting their academic milestones and 11 have graduated. Our post- doctoral trainees enroll in a master’s program (Computer Science or Advanced Sciences), in addition to completing our foundational BMI curriculum. These trainees are embedded in projects at the medical center that help them contextualize the research methods they learn through coursework. All of our short-term trainees are under-represented minorities in science and participate in various research projects leading to presentations and publications. Most trainees who completed our BMI training have research positions in industry and academia— a few are continuing their training, two are employed in non-profit organizations, and several became assistant professors at various institutions (Carnegie Mellon, UCLA, UCSF, UCSD, Vanderbilt, etc.). Some highlights of our training in the past five years have been the high productivity of our trainees, who are pursuing innovative research in a wide spectrum of informatics areas of specialization, from translational bioinformatics to clinical research informatics to healthcare informatics. Additionally, the proportion of women (57%) and under-represented minorities (49%) is high in our overall trainee pool. We have filled all of our slots each year with highly qualified candidates from diverse educational and cultural backgrounds, who have already produced first-author publications in high impact journals (e.g., Cell, Science, JAMIA, PNAS) and conferences.

摘要 圣地亚哥生物医学信息学教育与研究(SABER)培训项目被授予NLM 培训补助金于2012年夏季发放，并于2017年续签。在这份续订建议书中，我们描述了我们的 过去8.75年的成就和我们对未来五年的展望。军刀训练计划 包括加州大学圣地亚哥分校(UCSD)生物医学系的核心教员 信息学，以及整个加州大学圣地亚哥分校的多个教职员工。自2012年该项目开始以来，我们已经主办了78 长期和短期实习生。 我们的博士前实习生注册了竞争激烈的生物信息学和系统生物学(BISB)博士项目， 计算机科学、认知科学或生物医学科学。受训人员完成基础课程 生物医学信息学(BMI)，由我们的核心教员教授，以及他们各自学位的核心课程 程序。我们所有的实习生都达到了他们的学术里程碑，11人已经毕业。我们的帖子- 博士生注册硕士课程(计算机科学或高级科学)，除了 完成我们的BMI基础课程。这些受训人员被嵌入到医疗中心的项目中 帮助他们将通过课程学习到的研究方法与背景联系起来。我们所有的短期实习生都是 在科学界代表不足的少数群体，并参与各种研究项目，导致演讲和 出版物。大多数完成我们BMI培训的学员都在工业界和学术界担任研究职位- 一些人继续接受培训，两人受雇于非营利性组织，还有几人成为助理 不同机构(卡内基梅隆大学、加州大学洛杉矶分校、加州大学旧金山分校、加州大学圣地亚哥分校、范德比尔特大学等)的教授。 过去五年我们培训的一些亮点是我们的学员工作效率很高，他们是 在广泛的信息学专业领域进行创新研究，从翻译到 从生物信息学到临床研究信息学再到医疗信息学。此外，女性比例 (57%)和代表不足的少数族裔(49%)在我们的整体受训人员中占很高的比例。我们所有的空位都填满了 每年都有来自不同教育和文化背景的高素质候选人，他们已经 在影响较大的期刊(如《细胞》、《科学》、《Jamia》、《美国国家科学院院刊》)和会议上发表第一作者论文。