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San Diego Biomedical Informatics Education & Research (SABER)

圣地亚哥生物医学信息学教育

基本信息

批准号：
10616765
负责人：
SHAMIM NEMATI
金额：
$ 52.01万
依托单位：
UNIVERSITY OF CALIFORNIA, SAN DIEGO
依托单位国家：
美国
项目类别：
财政年份：
2012
资助国家：
美国
起止时间：
2012-07-01 至 2027-06-30
项目状态：
未结题

项目摘要

Abstract The San Diego Biomedical Informatics Education & Research (SABER) training program was awarded an NLM training grant in the summer of 2012 and renewed in 2017. In this renewal proposal, we describe our accomplishments for the past 8.75 years and our vision for the next five years. The SABER training program includes core faculty from the University of California San Diego (UCSD) Health Department of Biomedical Informatics, as well as multiple faculty across UCSD. Since the start of this program in 2012, we have hosted 78 long- and short-term trainees. Our pre-doctoral trainees enroll in competitive doctoral programs in Bioinformatics and Systems Biology (BISB), Computer Science, Cognitive Science, or Biomedical Sciences. Trainees complete a foundational curriculum in biomedical informatics (BMI), taught by our core faculty, in addition to core curricula from their respective degree programs. All of our trainees have been meeting their academic milestones and 11 have graduated. Our post- doctoral trainees enroll in a master’s program (Computer Science or Advanced Sciences), in addition to completing our foundational BMI curriculum. These trainees are embedded in projects at the medical center that help them contextualize the research methods they learn through coursework. All of our short-term trainees are under-represented minorities in science and participate in various research projects leading to presentations and publications. Most trainees who completed our BMI training have research positions in industry and academia— a few are continuing their training, two are employed in non-profit organizations, and several became assistant professors at various institutions (Carnegie Mellon, UCLA, UCSF, UCSD, Vanderbilt, etc.). Some highlights of our training in the past five years have been the high productivity of our trainees, who are pursuing innovative research in a wide spectrum of informatics areas of specialization, from translational bioinformatics to clinical research informatics to healthcare informatics. Additionally, the proportion of women (57%) and under-represented minorities (49%) is high in our overall trainee pool. We have filled all of our slots each year with highly qualified candidates from diverse educational and cultural backgrounds, who have already produced first-author publications in high impact journals (e.g., Cell, Science, JAMIA, PNAS) and conferences.

抽象的圣地亚哥生物医学信息学教育与研究 (SABER) 培训项目荣获 NLM 2012 年夏季提供培训补助金，并于 2017 年更新。在此更新提案中，我们描述了我们的过去8.75年的成就以及我们未来五年的愿景。 SABRE培训计划包括来自加州大学圣地亚哥分校 (UCSD) 健康生物医学系的核心教师信息学以及加州大学圣地亚哥分校的多名教员。自 2012 年启动该计划以来，我们已举办了 78 场长期和短期实习生。我们的博士前培训生参加生物信息学和系统生物学（BISB）的竞争性博士课程，计算机科学、认知科学或生物医学科学。学员完成基础课程除了各自学位的核心课程之外，由我们的核心教师教授生物医学信息学（BMI）程序。我们所有的学员都达到了他们的学术里程碑，其中 11 人已经毕业。我们的后博士生参加硕士课程（计算机科学或高级科学），此外完成我们的基础 BMI 课程。这些学员参与了医疗中心的项目，帮助他们将通过课程学习的研究方法结合起来。我们所有的短期实习生都是科学领域代表性不足的少数群体，并参与各种研究项目，从而进行演讲和出版物。大多数完成我们的 BMI 培训的学员都在工业界和学术界拥有研究职位—— 一些人正在继续接受培训，两人受雇于非营利组织，还有几人成为助理各个机构的教授（卡内基梅隆大学、加州大学洛杉矶分校、加州大学旧金山分校、加州大学圣地亚哥分校、范德比尔特大学等）。过去五年我们培训的一些亮点是学员的高生产力，他们在广泛的信息学专业领域追求创新研究，从转化到生物信息学到临床研究信息学到医疗保健信息学。此外，女性比例 (57%) 和代表性不足的少数族裔 (49%) 在我们的整体受训者池中占比较高。我们已经填满了所有空位每年都有来自不同教育和文化背景的高素质候选人，他们已经在高影响力期刊（例如 Cell、Science、JAMIA、PNAS）和会议上发表第一作者出版物。