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DATA MANAGEMENT AND RESOURCE REPOSITORY FOR THE exRNA ATLAS PHASE II

DATA MANAGEMENT AND RESOURCE REPOSITORY FOR THE exRNA ATLAS PHASE II
exRNA ATLAS II 期的数据管理和资源库
批准号:
10471812
负责人:
DAVID J. GALAS
金额:
$50.0万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2019
资助国家:
美国
项目状态:
已结题
起止时间:
2019-08-15 至 2024-07-31

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中文摘要
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英文摘要
Summary Generation of high-volume sequence data has become a routine part of genome research, genetics and the nascent field of precision medicine. With increasing interest in exRNA biology, the ability of researchers to make discoveries and extract clinically relevant knowledge from these data requires access to new types of tools and analytical approaches. However, the specialized tools and the expertise required for to develop and implement effective solutions are beyond reach of most researchers. To address this problem, we have assembled a team comprised of accomplished investigators to further host exRNA Portal resources and tools for exRNA biology. Building on the success of ERCC Stage 1, we will explore novel mechanisms to collect, identify, and characterize exRNA biotypes. Our team, in collaboration with Stage 2 investigators, will explore the use of computational deconvolution to complement UG3/UH3 physical separation and isolation methodologies to better characterize exRNA carriers and their cargo. By further extending our metadata standards for Stage 1/Stage 2, exRNA Atlas will become a unique data repository utilizing the emerging federated Data Commons based upon the principles of Findable, Accessible, Interoperable, and Reusable (FAIR) data. ERCC data will be linked with geographically distributed resources, thereby contributing to a continuous cycle of expanding knowledge and free flow of information. An agile DMRR governance structure will ensure responsiveness to the input from all ERCC Stage 2 stakeholders and to the needs of the community. Outreach and training will be targeted to various levels of expertise to ensure a lasting engagement with a diverse community of users and contributors. By accomplishing these goals, DMRR will empower researchers to make discoveries using exRNA datasets, and to extract from these datasets actionable information and apply new knowledge to improve human health.
期刊论文(3)
专著(0)
科研奖励(0)
会议论文
DOI: 10.1093/bioinformatics/btad368
发表时间: 2023-06-01
期刊: Bioinformatics (Oxford, England)
影响因子: --
作者: []
通讯作者:
ApoE Modifier Alleles for Alzheimer's Disease Discovered by Information Theory Dependency Measures: MIST Software Package.
通过信息理论依赖度量发现的阿尔茨海默氏病的ApoE修饰等位基因:雾软件包。
DOI: 10.1089/cmb.2022.0185
发表时间: 2023-03
期刊: Journal of computational biology : a journal of computational molecular cell biology
影响因子: --
作者: []
通讯作者:
DOI: 10.3389/fgene.2021.778416
发表时间: 2021
期刊: Frontiers in genetics
影响因子: 3.7
作者: [Alexander RP, Kitchen RR, Tosar JP, Roth M, Mestdagh P, Max KEA, Rozowsky J, Kaczor-Urbanowicz KE, Chang J, Balaj L, Losic B, Van Nostrand EL, LaPlante E, Mateescu B, White BS, Yu R, Milosavljevic A, Stolovitzky G, Spengler RM]
通讯作者: Spengler RM
Scientific Outreach Component
  • 批准号:
    10227157
  • 项目类别:
  • 资助金额:
    $79.43万
  • 财政年份:
    2019
  • 负责人:
    DAVID J. GALAS
  • 依托单位:
DATA MANAGEMENT AND RESOURCE REPOSITORY FOR THE exRNA ATLAS PHASE II
  • 批准号:
    10214125
  • 项目类别:
  • 资助金额:
    $100.0万
  • 财政年份:
    2019
  • 负责人:
    DAVID J. GALAS
  • 依托单位:
DATA MANAGEMENT AND RESOURCE REPOSITORY FOR THE exRNA ATLAS PHASE II
  • 批准号:
    9812071
  • 项目类别:
  • 资助金额:
    $149.42万
  • 财政年份:
    2019
  • 负责人:
    DAVID J. GALAS
  • 依托单位:
DATA MANAGEMENT AND RESOURCE REPOSITORY FOR THE exRNA ATLAS PHASE II
  • 批准号:
    10466423
  • 项目类别:
  • 资助金额:
    $99.2万
  • 财政年份:
    2019
  • 负责人:
    DAVID J. GALAS
  • 依托单位:
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