Atomic resolution experimental interrogation of hydride quantum tunnelling in enzyme reaction chemistry
Atomic resolution experimental interrogation of hydride quantum tunnelling in enzyme reaction chemistry
批准号:
BB/H000844/1
负责人:
Jon Waltho
金额:
$52.84万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2010
资助国家:
英国
项目状态:
已结题
起止时间:
2010 至 --
中文摘要
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英文摘要
Enzymes are phenomenal catalysts accelerating reactions by as much as 10^21 compared with the rate of the non-catalyzed reaction. In all living things, these enzymes are specialized protein molecules that catalyze biochemical reactions for carrying out specific biological functions. Over a number of years, chemists and biochemists alike have attempted to harness this catalytic potential of enzyme systems to accelerate reactions that do not normally occur in Nature. This exploitation of enzymes as 'designer' catalysts requires in-depth and quantitative understanding of the physical chemistry of enzyme action. The drive to understand the origin of the power of enzyme catalysis has led to the development of quantitative, physical models for enzyme catalysis - the most recent incorporating quantum phenomena such as 'tunnelling' - to explain rate accelerations by enzyme enzymes. This has been augmented by the elucidation of atomic structures of biological catalysts using structural biology methods such as X-ray crystallography and NMR spectroscopy. This has defined the 'structure determines function' paradigm for enzymes and the notion that biological catalysis can be driven, for example, by complementary interactions between substrate molecules (or high energy states thereof) and the protein. Despite these advances, our understanding of biological catalysis is very incomplete, and we are unable to account for several orders of magnitude of the catalytic power of enzymes using current physical models. A more recent focus has been on the role of protein motions or dynamics in driving biological catalysis. This invokes a flexible enzyme catalyst that, when in complex with a substrate, can explore a myriad of different structural states over a variety of different timescales (sub picosecond to seconds). The catalytic power of enzymes is linked to the dynamical properties of the protein, but structural biology methods provide only 'static' depictions of the catalyst, or at best provide a time averaged ensemble of structures that may, or may not, be important in catalysis. The major challenge to the field and one that will open up more effective exploitation of enzyme catalysts in general, is to provide improved theory and analysis of the link between dynamical change and rate acceleration. The paradigm has thus progressed to one in which 'dynamics determines function'. In this application, we propose novel structural biology approaches that will provide atomic level insight into those high energy structural sub-states of a biological catalyst that are populated only transiently (millisecond through to < picosecond). This knowledge will underpin the development of more detailed insight into catalytic processes in enzyme systems and will form a platform for the emergence of more rigorous theory that will ultimately facilitate the improved exploitation of enzymes.
期刊论文(6)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1002/anie.201305709
发表时间:
2013-10-25
期刊:
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
影响因子:
16.6
作者:
[Paudel, Liladhar, Adams, Ralph W., Kiraly, Peter, Aguilar, Juan A., Foroozandeh, Mohammadali, Cliff, Matthew J., Nilsson, Mathias, Sandor, Peter, Waltho, Jonathan P., Morris, Gareth A.]
通讯作者:
Morris, Gareth A.
Isotopically labeled flavoenzymes and their uses in probing reaction mechanisms.
同位素标记的黄素酶及其在探测反应机制中的用途。
DOI:
10.1016/bs.mie.2019.03.009
发表时间:
2019
期刊:
Methods in enzymology
影响因子:
--
作者:
[Iorgu AI]
通讯作者:
Iorgu AI
The Control of Non-Chemical Steps in Enzyme Catalysis
-
批准号:BB/S007695/1
-
项目类别:Research Grant
-
资助金额:$60.52万
-
财政年份:2019
-
负责人:Jon Waltho
-
依托单位:
Enzyme catalysis of nucleophilic attack of anions by anions
-
批准号:BB/M021637/1
-
项目类别:Research Grant
-
资助金额:$45.53万
-
财政年份:2016
-
负责人:Jon Waltho
-
依托单位:
Dynamics, Gating and Opening in Enzyme Catalysis
-
批准号:BB/K016245/1
-
项目类别:Research Grant
-
资助金额:$48.81万
-
财政年份:2013
-
负责人:Jon Waltho
-
依托单位:
Understanding enzyme-catalysed phosphoryl transfer
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批准号:BB/I002146/1
-
项目类别:Research Grant
-
资助金额:$59.16万
-
财政年份:2011
-
负责人:Jon Waltho
-
依托单位:
The influence of metal fluorides on the structure and dynamics of phosphoryl transfer enzymes
-
批准号:BB/E017541/1
-
项目类别:Research Grant
-
资助金额:$51.0万
-
财政年份:2007
-
负责人:Jon Waltho
-
依托单位:
Residue-specific contributions to the energetics of the catalytic cycle of PGK
-
批准号:BB/D01798X/1
-
项目类别:Research Grant
-
资助金额:$53.38万
-
财政年份:2006
-
负责人:Jon Waltho
-
依托单位:
国内基金
海外基金
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