Catalysis in motion: accessing how fast motions facilitate catalysis through pump-probe and fast time resolved spectroscopies.
Catalysis in motion: accessing how fast motions facilitate catalysis through pump-probe and fast time resolved spectroscopies.
批准号:
EP/J020192/1
负责人:
Nigel Scrutton
金额:
$135.08万
依托单位:
依托单位国家:
英国
项目类别:
Fellowship
财政年份:
2012
资助国家:
英国
项目状态:
已结题
起止时间:
2012 至 --
中文摘要
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英文摘要
The precise origin(s) of the catalytic power of enzymes remains an unresolved problem that hampers their exploitation in meeting contemporary challenges in, for example, chemicals and materials manufacture, the energy agenda and healthcare. While the role of electrostatic contributions, hydrogen bonding and desolvation to transition state stabilisation (and thus catalysis) have been long recognised as playing an important role, the involvement and contribution of dynamical effects - atomic motions across wide ranging timescales, from seconds to femtoseconds - remains controversial. Of particular note has been recent discussion of the direct coupling of dynamical effects (vibrations/motions) to the chemical (reaction) coordinate (i.e. to the making and breaking of bonds), and whether this enhances the rate of enzymatic reactions. In this application the focus is on fast motions at the femtosecond to picosecond timescale and the possible coupling of such motions to the chemical reaction coordinate. The purpose is to explore their potential contribution to both the catalytic effect on, and the observed rate of, the intrinsic chemical step, the models developed to account for their effect, and the experimental and theoretical studies that support the existence of such motions. The potential importance of these motions has largely arisen from studies of quantum mechanical tunnelling of hydrogen in enzyme systems, but is equally relevant to classical (over-the-barrier) reactions. The challenge is to develop atomistic understanding of such motions and develop more comprehensive models of enzyme catalysis that explicitly recognise the potential importance of fast dynamics in reaction barrier crossing. These aims and challenges will be addressed in an innovative programme integrating new capabilities in femtosecond spectroscopy with allied spectroscopy capabilities, isotope effect analysis and studies of model enzyme catalysts that are activated either thermally or by light.This is a truly cross disciplinary programme requiring expertise in ultrafast laser spectroscopy, physical chemistry, structural science, computation and modelling/theory. The applicant has assembled a unique team of experts across these disciplines based at the University of Manchester and the Harwell Research Complex. He has established leading capabilities in ultrafast spectrocopy and allied areas at Manchester and contributed to the development and use of new capabilities at Rutherford Appleton Laboratory in femtosecond IR spectroscopy. This combines to place the applicant in field-leading position and secure for the UK unique capabilities that will elucidate the role of fast dynamics in enzyme systems. The work addresses a major and controversial hypothesis in contemporary catalysis research which goes to the very heart of catalysis mechanisms. This will lead to more comprehensive understanding of bio-catalysis that will guide the predictive design of enzyme systems for use in synthetic biology and industrial applications, which is crucial to the emerging white (industrial) biotechnology economy.
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Stepwise Hydride Transfer in a Biological System: Insights into the Reaction Mechanism of the Light-Dependent Protochlorophyllide Oxidoreductase
生物系统中的逐步氢化物转移:深入了解光依赖性原叶绿素内酯氧化还原酶的反应机制
DOI:
10.1002/ange.201712729
发表时间:
2018
期刊:
Angewandte Chemie
影响因子:
--
作者:
[Archipowa N]
通讯作者:
Archipowa N
DOI:
10.1038/nature12039
发表时间:
2013-04-18
期刊:
Nature
影响因子:
64.8
作者:
[]
通讯作者:
DOI:
10.1186/s12934-020-01470-6
发表时间:
2020-11-13
期刊:
Microbial cell factories
影响因子:
6.4
作者:
[Amer M, Toogood H, Scrutton NS]
通讯作者:
Scrutton NS
Special Issue: Flavins and Flavoproteins: Introduction.
特刊:黄素和黄素蛋白:简介。
DOI:
10.1111/febs.13337
发表时间:
2015
期刊:
The FEBS journal
影响因子:
--
作者:
[Chaiyen P]
通讯作者:
Chaiyen P
DOI:
10.1002/anie.201712729
发表时间:
2018-03-01
期刊:
Angewandte Chemie (International ed. in English)
影响因子:
--
作者:
[Archipowa N, Kutta RJ, Heyes DJ, Scrutton NS]
通讯作者:
Scrutton NS
共 6 条
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Towards a Bio-based Manufacturing Platform for High Strength Aramid (Aromatic Polyamide) Synthetic Fibres Using Synthetic Biology
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Feasibility study to determine whether new generation catalytic antibodies can overcome existing limitations for future use in clinical settings.
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Why does Nature use modular enzyme architectures for biological catalysis?
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Innovative Routes to Monoterpene Hydrocarbons and Their High Value Derivatives
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An analysis of the commercial potential of menthol production using synthetic biology approaches.
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An advanced multi-purpose instrument for biological ultrafast time resolved spectroscopy
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CENTRE FOR SYNTHETIC BIOLOGY OF FINE AND SPECIALITY CHEMICALS
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Synthetic Biology for Biotechnology of Fine Chemicals - SynBioTech
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Dynamic structural science: exploring energy landscapes in complex enzyme systems
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Industrial chemicals of the monoterpenoid class realised through synthetic biology and pathway engineering
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Acceleration and control of spin-restricted oxygenation by cofactor-independent dioxygenases
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The dynamics of complex cellular machinery required for methionine synthesis in mammalian cells
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Elucidating mechanisms of proton coupled and conformationally coupled electron transfer in redox enzymes catalysis
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Reflection anisotropy spectroscopy as a new tool for linking macromolecular conformation to biological function: applications in biological redox chem
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依托单位:
国内基金
海外基金
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