Evolutionary Genetics of Tsetse and Its Symbionts

采采蝇及其共生体的进化遗传学

• 批准号: 8696158
• 负责人: Serap AKSOY
• 金额: $ 69.4万
• 依托单位: YALE UNIVERSITY
• 依托单位国家: 美国
• 财政年份: 2008
• 资助国家: 美国
• 起止时间: 2008-01-15 至 2019-01-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8696158
• 关键词: Africa South of the Sahara; African Trypanosomiasis; Animals; Biological Assay; Candidate Disease Gene; Competence; Country; DNA; Data; Development; Disease; Domestic Animals; Effectiveness; Environment; Epidemiology; Evaluation; Fright; Future; Genes; Genetic; Genetic Drift; Genetic Structures; Genetic Variation; Genetic Vectors; Genomics; Health; Health Care Costs; Human; Hypertrophy; Immune; Immune response; Impact evaluation; Infection; Interdisciplinary Study; Intervention; Knowledge; Maps; Methods; Metric; Modeling; Parasite resistance; Parasites; Partner in relationship; Pattern; Phenotype; Population; Population Dynamics; Population Group; Predisposition; Preparation; Public Health; Quality of life; Resistance; Resources; Risk; Role; Salivary Glands; Shapes; Spatial Distribution; Taxon; Testing; Time; Tissues; Trypanosoma; Trypanosoma brucei brucei; Trypanosoma brucei gambiense; Trypanosoma brucei rhodesiense; Trypanosomiasis; Tsetse Flies; Uganda; Variant; Virus; Wigglesworthia; Wolbachia; base; climate change; cost effective; cost effectiveness; design; disease transmission; disorder risk; environmental adaptation; environmental change; fly; gene discovery; genetic variant; genome sequencing; genome-wide; mathematical model; microbial; microbiome; pathogen; public health relevance; simulation; spatiotemporal; transmission process; vector; vector control

DESCRIPTION (provided by applicant): African trypanosomiasis impacts both human and animal health in Sub-Saharan Africa. Uganda is the only country that has both forms of the human African trypanosomiasis (HAT): Trypanosoma brucei gambiense (Tbg) in the north-west and Trypanosoma brucei rhodesiense (Tbr) in the south-east. Tbr cases have been migrating from their traditional foci in the south to central Uganda, with the two disease belts feared to merge in northern Uganda. This interdisciplinary project focuses on northern Uganda to understand HAT transmission dynamics and risk of Tbr and Tbg disease merger. Our findings will provide fundamental knowledge on the role of the vector in HAT epidemiology, and provide practical information to inform the development and implementation of effective control strategies. We propose five integrated aims to: 1) Analyze the genomic variation in Gff, its associated microbiome and parasite (Trypanosoma) using a multispecies SNP chip, 2) Characterize the expression and genetic variations of the Trypanosoma-resistance candidate genes in different Gff population groups, 3) Discover gene-environment associations and impacts of climate change on Ugandan Gff, 4) Understand genetic as well as microbiome contributions for differentiation of Gff populations and 5) Assess the impact of Gff dispersal on the effectiveness and cost-effectiveness of vector control for reducing trypanosomiasis burden. Our studies will produce 1) fundamental information on host-parasite interactions that will predict the potential risk of disease merger and its epidemiological consequences, 2) suitability maps for Gff based on genetic and environmental data to better plan and operate vector control activities, 3) candidate genes on parasite-resistance, environmental adaptations that can be used in downstream genetic control methods and 4) predictions on the most effective and cost-effective control methods for HAT.

描述(申请人提供)：非洲锥虫病影响撒哈拉以南非洲的人类和动物健康。乌干达是唯一有两种人类非洲锥虫病(HAT)的国家：西北部的布氏冈比亚锥虫(TBG)和东南部的布氏锥虫(TBR)。TBR病例一直在从乌干达南部的传统疫源地向中部迁移，乌干达北部的两个疾病带恐怕会合并。这一跨学科项目的重点是乌干达北部，以了解HAT传播动态和TBR和TBG疾病合并的风险。我们的发现将提供有关媒介在HAT流行病学中的作用的基本知识，并为制定和实施有效的控制策略提供实用信息。我们提出了五个综合目标：1)使用多物种SNP芯片分析GFF及其相关微生物群和寄生虫(锥虫)的基因组变异；2)表征不同GFF种群中锥虫耐药候选基因的表达和遗传变异；3)发现基因-环境关联和气候变化对乌干达GFF的影响；4)了解GFF种群分化的遗传和微生物群贡献；5)评估GFF扩散对媒介控制减少锥虫病负担的有效性和成本效益的影响。我们的研究将产生1)宿主-寄生虫相互作用的基本信息，这些信息将预测疾病合并的潜在风险及其流行病学后果，2)基于遗传和环境数据的GFF适宜性图，以更好地规划和操作媒介控制活动，3)寄生虫抗性的候选基因，可用于下游基因控制方法的环境适应，以及4)HAT最有效和最具成本效益的控制方法的预测。