Molecular Analysis of OSCC Tumor Invasion
Molecular Analysis of OSCC Tumor Invasion
批准号:
7565577
负责人:
BERT W O'MALLEY
金额:
$38.56万
依托单位国家:
美国
项目类别:
财政年份:
2009
资助国家:
美国
项目状态:
已结题
起止时间:
2009-07-20 至 2011-06-30
关键词:
AccountingAdenocarcinomaAdjuvant TherapyAreaArtsBehaviorBiological MarkersBlindedBrain NeoplasmsBreastCancer PatientCandidate Disease GeneCellular StructuresCervix NeoplasmsClassificationClinicClinicalCollaborationsCumulative Survival RatesCyclin D1DNADataData SetDetectionDevelopmentDevicesDiagnosisDiagnosticDiseaseDisease ProgressionDisseminated Malignant NeoplasmDistant MetastasisEngineeringEpidermal Growth Factor ReceptorEpithelialEpithelial CellsEpitheliumFaceFutureGene ExpressionGene Expression ProfileGene Expression ProfilingGenesGenomicsGingivaGliomaGoalsHead and Neck CancerHead and Neck SurgeryHumanImaging TechniquesIncidenceIndividualInvestigationLasersLeadLeftLiteratureLungLung AdenocarcinomaLymphLymph Node DissectionsLymph Node InvolvementLymphatic MetastasisMalignant GliomaMalignant NeoplasmsMalignant neoplasm of prostateMeasurementMechanicsMedicineMetastatic Neoplasm to Lymph NodesMethodsMicroarray AnalysisMicrodissectionMicrofluidicsModalityMolecularMolecular AnalysisMolecular BiologyMolecular GeneticsMolecular ProfilingMorbidity - disease rateMutationNeckNeoplasm MetastasisNeoplastic Cell TransformationNodalOperative Surgical ProceduresOral cavityOutcomeOvarianPancreasPathological StagingPathologistPathologyPathway interactionsPatientsPatternPennsylvaniaPhenotypePositive Lymph NodePrimary NeoplasmProceduresProstateProteinsRNARecurrenceRiskRoleSamplingSensitivity and SpecificitySignal PathwaySiteSpecimenStagingStaging SystemStromal CellsStromal NeoplasmSublingual RegionSurvival RateSystemTNMTP53 geneTestingTherapeuticTherapeutic StudiesTimeTissue MicroarrayTissuesTongue Squamous Cell CarcinomaTumor Cell InvasionTumor TissueUniversitiesValidationVariantWorkbasebladder CarcinomacDNA Arrayscancer classificationcancer microarrayclinical applicationcohortdesigneconomic impactgenetic profilinghigh riskimprovedinhibitor/antagonistlaser capture microdissectionlymph nodesmalignant breast neoplasmmalignant mouth neoplasmmalignant stomach neoplasmmedulloblastomameetingsmortalitymouth squamous cell carcinomaneoplasticneoplastic cellnew therapeutic targetnovelnovel therapeutic interventionoutcome forecastpoint of careprognosticprotein expressionstatisticstherapeutic targettreatment planningtumortumor progressionvalidation studies
中文摘要
淋巴结阳性口腔鳞状细胞癌(OSee)患者的5年生存率仅为20-30%
即使是多模式治疗。不幸的是,目前的分期系统不能预测osee肿瘤
淋巴结疾病或患者结果,并且没有单个基因被证明具有足够的预后效用。
此外,最先进的临床成像技术可能会错过亚临床转移。发现更多
一种预测淋巴结阳性原发性肿瘤和患者预后的准确而有力的方法,
需要鉴定和表征肿瘤微环境中表达的基因。使用
包括骨赘和间质成分的Affyellow微阵列和肿瘤样本,
我们已经发现了一个基因标记,它可以预测哪些原发性肿瘤会转移到
淋巴结在这个建议中,使用这个osee初步节点正签名进行比较,我们将
检验一个假设,即一个更准确和可靠的标志,用于预测osee淋巴结疾病
可以通过分别从OSEE肿瘤和间质中获得基因标记来鉴定
淋巴结阴性和阳性的Osee原发性肿瘤的组分。在Aim-1中,我们将使用微阵列,
激光捕获显微切割(LeM),并统计以识别Osee肿瘤细胞成分节点
使用Osee淋巴结阳性和阴性原发性肿瘤的阳性标记。在Aim-2中,我们将使用
微阵列、LeM和统计学来定义osee基质区室的节点阳性特征
使用OSEE淋巴结阳性和阴性原发肿瘤。两种分子特征都将得到验证
在RNA和蛋白质水平上。此外,将测试每个签名预测淋巴结疾病的能力
使用盲。osee肿瘤的队列。最后,将使用统计平台比较所有签名,
并且将使用相同的OSEE群组选择能够预测淋巴结阳性的最佳基因组
肿瘤的这项研究将涉及一个多学科的合作者团队,他们具有DNA和组织方面的专业知识。
微阵列、激光捕获显微切割、肿瘤和分子生物学、统计学、医学、头颈部
外科学和病理学以及多机构合作。除了找出最好的签名,
预测osee结疾病,这项研究的结果将确定基因,生物标志物和信号
肿瘤微环境中可作为诊断、预后和治疗靶点的通路
问题研究在该提议中鉴定的准确和可靠的淋巴结转移基因标签将具有
对降低OSEE患者死亡率和发病率具有深远的临床效用。
英文摘要
Patients with node positive oral squamous cell carcinomas (OSee) have a 5-year survival of only 20-30%
even with multi-modality treatment. Unfortunately, the current staging system does not predict osee tumor
nodal disease or patient outcome, and no single gene has been shown to have sufficient prognostic utility.
Moreover, state-of-the-art clinical imaging techniques can miss sub-clinical metastases. Discovering a more
accurate and powerful way of predicting lymph node positive primary tumors and patient outcomes will
require identification and characterization of the genes expressed within the tumor microenvironment. Using
Affymetrix microarrays and tumor specimens comprised of both osee neoplastic and stromal components,
we have discovered a gene signature that predicts which osee primary tumors will metastasize to the
lymph nodes. In this proposal, using this osee preliminary node positive signature for comparison, we will
test the hypothesis that a more accurate and reliable signature for prediction of osee lymph node disease
can be identified by separately acquiring gene signatures from the osee neoplastic and the stromal
components of lymph node negative and positive osee primary tumors. In Aim-1 we will use microarrays,
laser capture microdissection (LeM), and statistics to identify the osee Neoplastic cell component node
positive signature using osee lymph node positive and negative primary tumors. In Aim-2 we will use
microarrays, LeM and statistics to define a node positive signature for the osee Stromal compartment
using osee lymph node positive and negative primary tumors. Both molecular signatures will be validated
at the RNA and protein level. Additionally, each signature will be tested for its ability to predict nodal disease
using a blinded. cohort of osee tumors. Finally, all signatures will be compared using statistical platforms,
and the best set of genes will be selected that can predict node positivity using the same cohort of osee
tumors. This study will involve a multi-disciplinary team of collaborators with expertise in DNA and tissue
microarrays, laser capture microdissection, tumor and molecular biology, statistics, medicine, head and neck
surgery, and pathology as well as multi-institutional collaborations. Besides identifying the best signature for
prediction of osee nodal disease, the results from this study will identify genes, biomarkers and signaling
pathways in the tumor microenvironment that can be targeted for diagnostic, prognostic and therapeutic
studies. The accurate and reliable lymph node metastasis gene signature identified in this proposal will have
a profound clinical utility for reducing osee patient mortality and morbidity.
期刊论文(0)
专著(0)
科研奖励(0)
会议论文
Project 3: Coactivator-dependent hepatic 12h clock coordinates metabolic and stress rhythms
-
批准号:10421284
-
项目类别:
-
资助金额:$35.66万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Core A (Administrative/Bioinformatics/Statistics)
-
批准号:10153757
-
项目类别:
-
资助金额:$7.93万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Nuclear receptors and their Coactivators as Mediators of Systems Metabolism
-
批准号:10153756
-
项目类别:
-
资助金额:$150.58万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Project 3: Coactivator-dependent hepatic 12h clock coordinates metabolic and stress rhythms
-
批准号:10153762
-
项目类别:
-
资助金额:$35.66万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Nuclear receptors and their Coactivators as Mediators of Systems Metabolism
-
批准号:10421277
-
项目类别:
-
资助金额:$150.58万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Nuclear receptors and their Coactivators as Mediators of Systems Metabolism
-
批准号:9975144
-
项目类别:
-
资助金额:$150.58万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
Core A (Administrative/Bioinformatics/Statistics)
-
批准号:10421278
-
项目类别:
-
资助金额:$7.93万
-
财政年份:2018
-
负责人:BERT W O'MALLEY
-
依托单位:
The ERbeta/SRC-1 isoform complex drives endometriosis progression
-
批准号:8823016
-
项目类别:
-
资助金额:$20.0万
-
财政年份:2014
-
负责人:BERT W O'MALLEY
-
依托单位:
The ERbeta/SRC-1 isoform complex drives endometriosis progression
-
批准号:9258329
-
项目类别:
-
资助金额:$21.56万
-
财政年份:2014
-
负责人:BERT W O'MALLEY
-
依托单位:
The ERbeta/SRC-1 isoform complex drives endometriosis progression
-
批准号:8893195
-
项目类别:
-
资助金额:$1.56万
-
财政年份:2014
-
负责人:BERT W O'MALLEY
-
依托单位:
The ERbeta/SRC-1 isoform complex drives endometriosis progression
-
批准号:8837524
-
项目类别:
-
资助金额:$21.02万
-
财政年份:2014
-
负责人:BERT W O'MALLEY
-
依托单位:
Reproductive Hormones - Biological and Molecular Actions
-
批准号:8097015
-
项目类别:
-
资助金额:$10.9万
-
财政年份:2010
-
负责人:BERT W O'MALLEY
-
依托单位:
PROJECT 1 - Endometrial Steroid Receptor Coregulator-2 in Peri-Implantation Biolo
-
批准号:7683501
-
项目类别:
-
资助金额:$23.43万
-
财政年份:2009
-
负责人:BERT W O'MALLEY
-
依托单位:
Center for Reproductive Biological Research
-
批准号:7931854
-
项目类别:
-
资助金额:$3.5万
-
财政年份:2009
-
负责人:BERT W O'MALLEY
-
依托单位:
CORE A - ADMINISTRATIVE AND BIOSTATISTICS CORE
-
批准号:7683516
-
项目类别:
-
资助金额:$17.35万
-
财政年份:2009
-
负责人:BERT W O'MALLEY
-
依托单位:
Molecular Analysis of OSCC Tumor Invasion
-
批准号:7896677
-
项目类别:
-
资助金额:$39.16万
-
财政年份:2009
-
负责人:BERT W O'MALLEY
-
依托单位:
REGULATORY MECHANISMS OF SRC FAMILY COACTIVATION IN ADIPOGENESIS
-
批准号:7477175
-
项目类别:
-
资助金额:$37.87万
-
财政年份:2007
-
负责人:BERT W O'MALLEY
-
依托单位:
Knock-in of Posttranslational Mutations of Nuclear Receptor Coregulator Genes
-
批准号:7350617
-
项目类别:
-
资助金额:$13.29万
-
财政年份:2007
-
负责人:BERT W O'MALLEY
-
依托单位:
Administrative
-
批准号:7350633
-
项目类别:
-
资助金额:$4.47万
-
财政年份:2007
-
负责人:BERT W O'MALLEY
-
依托单位:
Core--
-
批准号:7500434
-
项目类别:
-
资助金额:$13.84万
-
财政年份:2007
-
负责人:BERT W O'MALLEY
-
依托单位:
国内基金
海外基金
大肠癌发生机制的adenoma-adenocarcinoma pathway同serrated pathway的关系的研究
-
批准号:30840003
-
项目类别:专项基金项目
-
资助金额:12.0万元
-
批准年份:2008
-
负责人:焦宇飞
-
依托单位: