Cross-talk between DNA repaif and recombination : two kinds of mechanisms that are mediated by DNA end-joining
Cross-talk between DNA repaif and recombination : two kinds of mechanisms that are mediated by DNA end-joining
批准号:
10480189
负责人:
IKEDA Hideo
金额:
$7.3万
依托单位国家:
日本
项目类别:
Grant-in-Aid for Scientific Research (B)
财政年份:
1998
资助国家:
日本
项目状态:
已结题
起止时间:
1998 至 2001
中文摘要
我们利用新开发的检测系统分析了大肠杆菌、芽殖酵母、裂变酵母和小鼠的非合法重组机制及其与DNA修复机制的关系。通过对具有超重组表型的E.coil DNA螺旋酶突变体的分析,我们发现DNA螺旋酶的几个α-螺旋结构在非法重组中起重要作用。E.coil DNA结合蛋白HU具有抑制DNA回转介导的非法重组的活性,从而对重组起到调控作用。我们还发现DNA解旋酶、核酸外切酶VIII (RecE)、RecT和DNA连接酶参与了大肠杆菌DNA损伤诱导的非法重组。此外,许多DNA修复酶UvrA、UvrB、MutM、Tag、AIkA、ExoI、H-NS和StpA在抑制DNA损伤诱导的非法重组中发挥重要作用。在酿酒酵母中发现一种DNA拓扑异构体II抑制剂诱导非法重组,提示DNA拓扑异构体II通过DNA末端连接促进DNA双链断裂,进而促进非法重组。另一方面,研究表明Sgsl蛋白抑制自发的非法重组。人类BLM和WRN蛋白也抑制了出芽酵母中的非法重组。此外,我们发现出芽酵母Sccl和裂变酵母Dhpl蛋白参与DNA修复和染色体分离,出芽酵母Whip和裂变酵母Mogi和Hskl激酶分别与Sgs 1和Sec 1相互作用。基于这些结果,我们提出了E.coil和酵母的几种不正当重组模型。
英文摘要
We analysed mechanisms of illegitimate recombination and its relationship with mechanisms of DNA repair, using newly developed assay systems for illegitimate recombination in Escherichia coli, budding yeast, fission yeast and mouse. Based on the analyses of E.coil DNA gyrase mutants that confer a hyper-recombination phenotype, we showed that several α-helix structures of DNA gyrase plays an important role in illegitimate recombination. It is also shown that E.coil DNA binding protein HU has an activity that suppress DNA gyrasemediated illegitimate recombination, thus playing a role in regulation of the recombination. We have also found that DnaB helicase, exonuclease VIII (RecE), RecT, and DNA ligase are involved in DNA damage-induced illegitimate recombmation in E. coli. Furthermore, many DNA repair enzymes UvrA, UvrB, MutM, Tag, AIkA, ExoI, H-NS, and StpA play important roles for suppression of DNA damage-induced illegitimate recombination. In Saccharomyces cerevisiae, it was found that a DNA topoisomemse II inhibitor induces illegitimate recombination, suggesting that DNA topoisomemse II promotes DNA double-strand bieak and then illegitimate recombination throgh DNA end-joining. It is, on the other hand, shown that Sgsl protein suppresses spontaneous illegitimate recombination. Human BLM and WRN proteins also suppressed illegitimate recombination in budding yeast. In addition, we showed that budding yeast Sccl and fission yeast Dhpl proteins are involved in DNA repair and chromosome segregation and that budding yeast Whip and fission yeast Mogi and Hskl kinase interact with Sgs 1 and Sec 1, respectively. Based on these results, we proposed several models for illegitimate recombination in E.coil and yeast.
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Hanada, K., Iwasaki, M., Ihashi, S. and Ikeda, H.: "UvrA and UvrB suppresses illegitimate recombination : Synergistic action with RecQ helicase."Proc. Nat1.Acad. Sci.. USA 97. 5989-5994 (2000)
Hanada, K.、Iwasaki, M.、Ihashi, S. 和 Ikeda, H.:“UvrA 和 UvrB 抑制非法重组:与 RecQ 解旋酶的协同作用。”Proc。
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通讯作者:
Onda, M., Yamaguchi, J., Hanada, K., Asami, Y., and Ikeda, H.: "Role of DNA ligase in the illegitimate recombination that generates λbio transducing phages."Genetics. 158. 29-39 (2001)
Onda, M.、Yamaguchi, J.、Hanada, K.、Asami, Y. 和 Ikeda, H.:“DNA 连接酶在生成 λbio 转导噬菌体的非法重组中的作用。”遗传学 158. 29-39( 2001)
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Sato, Y., Shimamoto, A., Shobuike, T., Sugimoto, M., Ikeda, H., Kuroda, S. and Furiichi, Y.: "Coloning and characterization of human Sep1 (hSEP1) gene and cytoplasmic localization of its product."DNA Res.. 5. 241-246 (1998)
Sato, Y.、Shimamoto, A.、Shobuike, T.、Sugimoto, M.、Ikeda, H.、Kuroda, S. 和 Furiichi, Y.:“人类 Sep1 (hSEP1) 基因的克隆和表征以及细胞质定位
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Y.Inagaki,: "Genomic organization of the genes encoding dihydroflavonol 4-reductase for flower pigmentation in the Japanese and common morning glories" Gene. (in press).
Y.Inagaki,:“编码二氢黄酮醇 4-还原酶的基因的基因组组织,用于日本和常见牵牛花的花朵色素沉着”基因。
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Shanado,Y.,Kato,J.and Ikeda,H.: "Escherichia coli HU protein suppresses DNA-gyrase-mediated illegitimate recombination and SOS induction." Genes Cells. 3. 511-520 (1998)
Shanado, Y.、Kato, J. 和 Ikeda, H.:“大肠杆菌 HU 蛋白抑制 DNA 旋转酶介导的非法重组和 SOS 诱导。”
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共 72 条
Semi-strong interactions of front and pulse solutions in reaction-diffusion systems
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批准号:22540118
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.66万
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财政年份:2010
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Studies on Curriculum Development for Science and Mathematics Teacher Training in Developing Countries and Evaluation of the Curriculum
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Mathematical analysis of front and pulse dynamics in heterogeneous diffusive media
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财政年份:2007
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负责人:IKEDA Hideo
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Development of Hands-on Teaching Materials for International Science Teacher Training and It's Evaluation
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批准号:17300250
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$10.84万
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财政年份:2005
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负责人:IKEDA Hideo
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依托单位:
Research on the Development of Multimedia Educational Tool for Student Hands-on Activities in Biology and Environment Education, and it's Applicability for International Cooperation in Developing Country.
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批准号:14380059
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$7.3万
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财政年份:2002
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负责人:IKEDA Hideo
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依托单位:
On the existence and stability of singularly perturbed solutions for one-activator and two-inhibitors reaction-diffusion models
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批准号:13640107
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$0.96万
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财政年份:2001
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负责人:IKEDA Hideo
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依托单位:
Global structure of traveling waves in 3-component competition-diffusion systems
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批准号:11640107
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$2.5万
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财政年份:1999
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负责人:IKEDA Hideo
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依托单位:
Development of the multimedia teaching programs of cell division and reproduction.
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批准号:09480023
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项目类别:Grant-in-Aid for Scientific Research (B)
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资助金额:$1.6万
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财政年份:1997
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负责人:IKEDA Hideo
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依托单位:
Bifurcation of traveling spot patterns in 2-dimensional domain
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批准号:09640252
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项目类别:Grant-in-Aid for Scientific Research (C)
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资助金额:$1.73万
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财政年份:1997
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负责人:IKEDA Hideo
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依托单位:
ABSORPTION, TRANSLOCATION AND ASSIMILATION OF ^<16>N AND ^<45>Ca IN SOME VERGETABLE CROPS
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批准号:08456023
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资助金额:$4.74万
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财政年份:1996
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负责人:IKEDA Hideo
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依托单位:
A BASIC STUDY FOR DEVELOPING THE DIAGNOSIS AND RECOMMENDATION INTEGRATED SYSTEM FOR HORTICULTURAL PLANTS.
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批准号:04556004
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资助金额:$10.05万
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财政年份:1992
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依托单位:
Studies on Mechanisms of DNA Rearrangements in Mammalian Cells.
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批准号:63440086
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资助金额:$15.17万
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财政年份:1988
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负责人:IKEDA Hideo
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依托单位:
海外基金