SGER: A multi-user, combined thermal cycler and microfluorimeter for studies of marine organisms

SGER：用于研究海洋生物的多用户组合热循环仪和微量荧光计

• 批准号: 0075927
• 负责人: Brian Palenik
• 金额: $ 3万
• 依托单位: University of California-San Diego Scripps Inst of Oceanography
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2000
• 资助国家: 美国
• 起止时间: 2000-05-15 至 2001-04-30
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=0075927&HistoricalAwards=false
• 关键词: SGER; multi; user; combined; thermal

This award will enable the purchase of an instrument that combines a rapid thermocycler with a microspectrofluorimeter. This technology allows the quantification of a PCR reaction as it occurs in real time and thus can convert the qualitative results typical of PCR into quantitative ones using the sensitivity and precision of the fluorimeter. Quantitative PCR is emerging as a potentially crucial, but still "risky" technique in the study of marine organisms. The barrier of instrumentation cost has also limited its development as a tool in marine sciences. The researchers will initially use the instrument in the detection of specific microorganisms (free-living photoautotrophs, heterotrophs, symbionts, and pathogens) in the marine environment, with the goal of developing a fundamental understanding of the mechanisms controlling microbial biodiversity. The detection of the genes for various microbial activities such as toxic metal metabolism or nutrient stress responses is a second potential use. Lastly, population genetic studies of eukaryotic marine organisms such as copepods and sea urchins will benefit from the utilization of the proposed instrument. Three laboratories in the Marine Biology Research Division of Scripps Institution of Oceanography, University of California, San Diego, will begin as major users of the instrument (Palenik, Azam and Burton), but use of the instrument will likely extend to several other labs. In all cases the instrument will be valuable in generating results that will open new research directions in marine sciences and provide preliminary results for future NSF proposals.

该奖项将使购买的仪器，结合了快速热循环仪与显微荧光光谱仪。 该技术允许PCR反应在真实的时间发生时进行定量，因此可以使用荧光计的灵敏度和精确度将PCR典型的定性结果转换为定量结果。 在海洋生物的研究中，定量PCR正在成为一种潜在的关键，但仍然是“危险”的技术。 仪器成本的障碍也限制了其作为海洋科学工具的发展。 研究人员最初将使用该仪器检测海洋环境中的特定微生物（自由生活的光合自养生物，异养生物，共生体和病原体），目标是对控制微生物生物多样性的机制有一个基本的了解。 检测各种微生物活性的基因，如有毒金属代谢或营养胁迫反应是第二个潜在的用途。 最后，桡足类和海胆等真核海洋生物的群体遗传学研究将受益于拟议仪器的使用。 加州大学圣地亚哥分校斯克里普斯海洋学研究所海洋生物学研究处的三个实验室（Palenik、Azam和Burton）将开始成为该仪器的主要用户，但该仪器的使用可能会扩展到其他几个实验室。 在所有情况下，该仪器将在产生结果方面发挥重要作用，这些结果将开辟海洋科学的新研究方向，并为国家科学基金会未来的提案提供初步结果。