MRI: Acquisition of a liquid chromatograph mass spectrometer for microbial metabolomics

MRI：购买用于微生物代谢组学的液相色谱质谱仪

• 批准号: 1228770
• 负责人: Anitra Ingalls
• 金额: $ 61.78万
• 依托单位: University of Washington
• 依托单位国家: 美国
• 项目类别: Standard Grant
• 财政年份: 2012
• 资助国家: 美国
• 起止时间: 2012-09-15 至 2016-08-31
• 项目状态: 已结题
• 来源: https://www.nsf.gov/awardsearch/showAward?AWD_ID=1228770&HistoricalAwards=false
• 关键词: MRI; Acquisition; liquid; chromatograph; mass

The PIs request funding to acquire a state of the art ultra high pressure liquid chromatograph coupled to a quadrupole time of flight mass spectrometer to study the metabolic function of microorganisms that have relevance in natural and engineered systems. Environmental metabolomics seeks to demonstrate and quantify the metabolic reactions that occur in microbial systems. New directions in proteomics, and even more so in metabolomics, bring biogeochemists closer to the chemistry of natural systems by enabling the measurement of the enzymes responsible for these reactions (proteomics), or the transformations of their substrates and products (metabolomics). While numerous high-end LC-MS instruments exist in research labs within the medical sciences, only a select few environmental microbiology labs nationwide have high-end instruments capable of addressing the complex problem of microbial function. Microbial metabolomics has the potential to transform our understanding of the metabolic capabilities of microbes and to understand at a biochemical level how microbes function and respond to environmental cues. The goals of this proposed equipment acquisition are to bring the field of mass spectrometry based metabolomics to the study of environmental microbiology and engineered microbial systems; to advance this field through the development of novel metabolomics approaches; to facilitate sharing of knowledge between investigators through a user group community; and to train the next generation of investigators in high mass accuracy mass spectrometry and its application to the study of the microbial world.Broader Impacts: Traditionally high end mass spectrometers are housed in specialized facility with dedicated personnel, where users submit samples for analysis without direct access to the instrument. The proposal here will make the instrument accessible to large number of postdoc, graduate students, and undergraduates including underrepresented groups after proper training, thus will greatly promote teaching, training and learning activities for mass spectrometry technologies. The method and technology developed will certainly be very useful for broad metabolomics community, where there still lacks a "standard" methodology.Program Recommendation: The Program recommends an award at the requested level.

PI要求获得资金，以获得最先进的超高压液相色谱仪与四极杆飞行时间质谱仪的耦合，以研究与自然和工程系统相关的微生物的代谢功能。环境代谢组学旨在证明和量化微生物系统中发生的代谢反应。蛋白质组学的新方向，尤其是代谢组学的新方向，通过测量负责这些反应的酶（蛋白质组学）或其底物和产物的转化（代谢组学），使生物化学家更接近自然系统的化学。 虽然医学科学的研究实验室中存在许多高端LC-MS仪器，但全国范围内只有少数几个环境微生物实验室拥有能够解决微生物功能复杂问题的高端仪器。微生物代谢组学有可能改变我们对微生物代谢能力的理解，并在生物化学水平上了解微生物如何发挥作用并对环境线索做出反应。这一拟议设备购置的目标是将基于质谱的代谢组学领域引入环境微生物学和工程微生物系统的研究;通过开发新的代谢组学方法推进这一领域;通过用户群体促进研究人员之间的知识共享;并培训下一代高质量准确度质谱法及其在微生物世界研究中的应用方面的研究人员。更广泛的影响：传统的高端质谱仪安装在配备专门人员的专门设施中，用户在不直接访问仪器的情况下提交样品进行分析。该提案将使大量博士后，研究生和本科生，包括经过适当培训的代表性不足的群体，可以使用该仪器，从而大大促进质谱技术的教学，培训和学习活动。开发的方法和技术肯定会对广泛的代谢组学社区非常有用，那里仍然缺乏一个“标准”的方法。计划建议：该计划建议在所要求的水平上授予奖励。