Zoomorphologie auf eScience vorbereiten: 1) Datenstandards für die Zoomorphologie; 2) Basic Formal Ontology & Granularität; 3) Domain Referenz Ontologie für die Anatomie der Metazoa; 4) Modul für ontologiebasierte morphologischen Beschreibungen für Morph
Zoomorphologie auf eScience vorbereiten: 1) Datenstandards für die Zoomorphologie; 2) Basic Formal Ontology & Granularität; 3) Domain Referenz Ontologie für die Anatomie der Metazoa; 4) Modul für ontologiebasierte morphologischen Beschreibungen für Morph
批准号:
225236126
负责人:
Dr. Lars Vogt
金额:
$0.0万
依托单位国家:
德国
项目类别:
Research Grants
财政年份:
2013
资助国家:
德国
项目状态:
已结题
起止时间:
2012-12-31 至 2014-12-31
中文摘要
点击翻译按钮获取中文摘要
英文摘要
Within the last decades, research practice in life sciences has changed significantly. The development of high-throughput techniques lead to the emergence of data-intensive science, with the consequence that more and more scientists use computers for data exploration. It is already common practice to compile new datasets from openly available data and analyze them under new premises. Because this new approach to science requires online data repositories and applications of the semantic web, it is commonly referred to as eScience. Unfortunately, because of two basic problems, zoomorphology did not take part in eScience so far: 1) its published data exist only in the literature and are thus not openly available and accessible via the internet and, ultimately, get lost (especially the corresponding unpublished raw data: images, serial sections, etc.); 2) to date, morphological descriptions cannot be deposited in general data repositories, because respective standards are not existing, i.e. taxon-independent, homology-free anatomy terminologies and a formalized method of documentation of data that makes morphological descriptions computer parsable. The solution to both problems involves the use of modern terminologies, i.e. ontologies (see OBO Foundry; http://www.obofoundry.org). The required anatomical ontologies still have to be developed. In order to be compatible with each other, they must use a Domain Reference Ontology for Metazoan Anatomy (DROMA) as template, which has to be developed as well. Moreover, to be compatible with the other OBO ontologies, DROMA must be based on OBO's top-level ontology, i.e. the Basic Formal Ontology (BFO). In order to accommodate biological reality, BFO must be extended by several categories. Therefore, this proposal is divided into four aspects: 1) continue developing the web pages of the recently started International Consortium of Zoomorphology Standards (http://iczs.org) and launch an internal Data Interest Group; 2) extending BFO and developing a general granularity framework that enables the organization and management of different perspectives on anatomical entities (purely anatomical, developmental, evolutionary, physiologically, etc.) in data repositories; 3) investigating the premises for the development of DROMA and developing DROMA; 4) developing a module for conducting ontology-based descriptions that will establish the already existing morphological database MorphDBase (http://www.morphdbase.de/) as a modern data repository for zoomorphological data and therewith providing an openly and freely accessible online web-portal for generating ontology-based descriptions. The resulting morphological data will be sustainably accessible to all biologists, and zoomorphology would be ready for eScience.
期刊论文(1)
专著(0)
科研奖励(0)
会议论文
DOI:
10.1002/jmor.20138
发表时间:
2013-07
期刊:
Journal of Morphology
影响因子:
1.5
作者:
[Lars Vogt;M. Nickel;R. Jenner;A. Deans]
通讯作者:
Lars Vogt;M. Nickel;R. Jenner;A. Deans
MorphDBase - Morphological Description Data Base
-
批准号:16808988
-
项目类别:Priority Programmes
-
资助金额:$0.0万
-
财政年份:2005
-
负责人:Dr. Lars Vogt
-
依托单位:
Molekulare Techniken zur Rekonstruktion der Phylogenie der Protostomia
-
批准号:5430743
-
项目类别:Research Fellowships
-
资助金额:$0.0万
-
财政年份:2004
-
负责人:Dr. Lars Vogt
-
依托单位:
国内基金
海外基金
登录
查看更多内容
银杏内生真菌中PTP1B抑制剂基于AUF-GNPS的挖掘及降糖机制研究
-
批准号:
-
项目类别:省市级项目
-
资助金额:--
-
批准年份:2025
-
负责人:
-
依托单位:
AUF-LC-MS+Blocker技术导向的海洋放线菌中PTP1B变构抑制剂的挖掘及其改善胰岛素抵抗作用研究
-
批准号:82304349
-
项目类别:青年科学基金项目
-
资助金额:30万元
-
批准年份:2023
-
负责人:杨理
-
依托单位:
当归四逆汤经由多发性骨髓瘤外泌体MALAT1干预AUF1/VEGFA相互作用调控血管新生的研究
-
批准号:--
-
项目类别:面上项目
-
资助金额:52万元
-
批准年份:2022
-
负责人:崔兴
-
依托单位:
AUF1与HuR调控肝衰老过程中脂肪酸合成的机制
-
批准号:--
-
项目类别:面上项目
-
资助金额:52万元
-
批准年份:2022
-
负责人:朱丽君
-
依托单位:
BnaA1.CIPK6磷酸化修饰AUF1负调控油菜种子和角果发育的分子机制
-
批准号:--
-
项目类别:面上项目
-
资助金额:55万元
-
批准年份:2022
-
负责人:卢坤
-
依托单位:
Linc01093通过hnRNP C/AUF1复合体调控FOXQ1重塑肿瘤微环境促进结直肠癌肝转移的机制研究
-
批准号:--
-
项目类别:面上项目
-
资助金额:54.7万元
-
批准年份:2021
-
负责人:熊斌
-
依托单位:
AUF1在TRX1不同表达水平HP感染致胃黏膜病变中作用及机制研究
-
批准号:82070577
-
项目类别:面上项目
-
资助金额:55.0万元
-
批准年份:2020
-
负责人:丁士刚
-
依托单位:
丝氨酸代谢介导AUF1 m6A RNA修饰抑制代谢检查点MAT2A重塑胶质瘤免疫抑制微环境
-
批准号:82002634
-
项目类别:青年科学基金项目
-
资助金额:24.0万元
-
批准年份:2020
-
负责人:王开开
-
依托单位:
ROS-AUF1-TRIM22途径在骨性关节中的作用及其机制研究
-
批准号:LBY21H060003
-
项目类别:省市级项目
-
资助金额:--
-
批准年份:2020
-
负责人:潘宗友
-
依托单位:
p37亚型AUF1上调3-磷酸甘油酸脱氢酶在胰腺癌吉西他滨耐药中的作用
-
批准号:81902465
-
项目类别:青年科学基金项目
-
资助金额:21.0万元
-
批准年份:2019
-
负责人:姜静宜
-
依托单位: