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gamma-modified triphosphates of nucleoside analogues as potential antivirals and lipophilic prodrugs therof

作为潜在抗病毒药的核苷类似物的γ-修饰三磷酸酯及其亲脂性前药

基本信息

批准号：
329712853
负责人：
Professor Dr. Chris Meier
金额：
--
依托单位：
Institut für Organische Chemie
依托单位国家：
德国
项目类别：
Research Grants
财政年份：
2017
资助国家：
德国
起止时间：
2016-12-31 至 2020-12-31
项目状态：
已结题

来源：
https://gepris.dfg.de/gepris/projekt/329712853?language=en
关键词：
gamma modified triphosphates nucleoside analogues

项目摘要

Nucleoside analogues have significant impact as antiviral agents in chemotherapy. However, there are also two major drawbacks associated with the use of these compounds. First, they require an intracellular metabolism to form the nucleoside triphosphate which is the ultimately active metabolite. Second, they can not only interact with viral polymerases but can also act as substrates of human polymerases which might result in severe toxic side effects. With the project presented here we aim not only to bypass the often rate-limiting metabolism in the triphosphate formation but also to develop a entirely new approach resulting potentially in an improvement in the substrate selectivity between viral and human polymerases by using gamma-modified nucleoside analogue triphosphates as putative antiviral agents. Here we would like to work on three different aspects:1. We will synthesize and study gamma-modified nucleoside analogue triphosphates as potential substrates of viral polymerases in comparison with the human polymerases. The gamma modification should be constructed as such, that this modifcation is a non-cleavable moiety, which is covalently attached to the triphosphate unit. By that, this moiety prevents also the enzymatic degradation of the triphosphate unit of the nucleoside triphosphate. In recent studies we showed that the gamma-acyloxybenzyl-modified triphosphate of the known antiviral 3-deoxy-2,3-didehydrothymidine (d4T) was acting as a substrate of HIVs reverse transcriptase which led to the incorporation of d4TMP into DNA-strands. In contrast, this gamma-modified triphosphate was not a substrate of human polymerase beta. Interestingly, the parent compound d4TTP was also a substrate of DNA-polymerase beta. Due to this difference in selectivity this offers now a completely new option for the use of gamma-modified triphosphate analogues. This is of tremendous importance in the context of possible toxic side effects which are caused by the interaction of the triphosphate with the cellular polymerases. As gamma-modifications we propose on the one hand non-cleavable acylbenzyl-(ketone) moieties which resemble closely the previously used bioreversible acyloxybenzyl-groups and on the other hand lipophilic alkyl-residues.2. It is expected that the gamma-modified triphosphates will not be up-taken by cells due to the negative charges at the triphosphate-moiety. Therefore, lipophilic prodrugs of these gamma-modified triphosphate analogues will be developed. We aim to introduce enzyme-cleavable masking groups, e.g acyloxybenzyl-groups. Studies to elucidate the hydrolysis mechanism, stability studies in biological media such as cell extracts and antiviral tests will guide us to optimized prodrug molecules.3. The cellular up-take of the new prodrugs of the gamma-modified nucleoside triphosphates will be studied by incorporating the fluorescent bicyclic nucleoside analogue (BCNA) and cell incubation assays.

核苷类似物作为抗病毒药物在化疗中具有重要作用。然而，也存在与这些化合物的使用相关的两个主要缺点。首先，它们需要细胞内代谢以形成核苷三磷酸，这是最终的活性代谢物。其次，它们不仅可以与病毒聚合酶相互作用，而且还可以作为人类聚合酶的底物，这可能导致严重的毒副作用。与这里提出的项目，我们的目标不仅是绕过经常限速代谢的三磷酸形成，但也开发了一个全新的方法，从而可能在病毒和人类聚合酶之间的底物选择性的改善，通过使用γ-修饰的核苷类似物三磷酸作为推定的抗病毒剂。在这里，我们想在三个不同的方面工作：1。我们将合成和研究γ-修饰的核苷类似物三磷酸作为病毒聚合酶的潜在底物，并与人类聚合酶进行比较。γ修饰应如此构建，使得该修饰是共价连接至三磷酸单元的不可裂解部分。由此，该部分还防止核苷三磷酸的三磷酸单元的酶促降解。在最近的研究中，我们发现已知的抗病毒3-脱氧-2，3-二脱氢胸苷（d4 T）的γ-酰氧基苄基修饰的三磷酸作为HIV逆转录酶的底物，导致d4 TMP掺入DNA链中。相比之下，这种γ-修饰的三磷酸不是人聚合酶β的底物。有趣的是，母体化合物d4 TTP也是DNA聚合酶β的底物。由于这种选择性的差异，这为使用γ-修饰的三磷酸类似物提供了一种全新的选择。这在由三磷酸与细胞聚合酶的相互作用引起的可能的毒副作用的背景下是非常重要的。作为γ-修饰，我们一方面提出了不可裂解的酰基苄基-（酮）部分，其与先前使用的生物可逆的酰氧基苄基基团非常相似，另一方面提出了亲脂性烷基残基。预期γ-修饰的三磷酸盐由于三磷酸盐部分的负电荷而不会被细胞摄取。因此，将开发这些γ-修饰的三磷酸类似物的亲脂性前药。我们的目标是引入酶可裂解的掩蔽基团，例如酰氧基苄基。对水解机理的研究、在生物介质如细胞提取物中的稳定性研究和抗病毒试验将指导我们优化前药分子.将通过结合荧光双环核苷类似物（BCNA）和细胞孵育试验研究γ-修饰的核苷三磷酸的新前药的细胞摄取。