STRUCTURAL CHARACTERIZATION OF HIGH AFFINITY GLYCOPEPTIDES OF GLYCAM 1
STRUCTURAL CHARACTERIZATION OF HIGH AFFINITY GLYCOPEPTIDES OF GLYCAM 1
批准号:
6308830
负责人:
ROBERT REID TOWNSEND
金额:
$0.99万
依托单位国家:
美国
项目类别:
财政年份:
2000
资助国家:
美国
项目状态:
已结题
起止时间:
2000-03-01 至 2002-02-28
中文摘要
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英文摘要
Structural Characterization of the High Affinity Glycopeptides of
Glycam-1, a physiological ligand of L-selectin. The binding of the
selectins (calcium-dependent lectin-like receptors) to their
endogenous glycoprotein ligands mediates the initial interactions
between leukocytes and endothelia. L-selectin is involved in the
trafficking of leukocytes to inflammatory sites and to organized
lymphoid organs. A glycosylated cell adhesion molecule (GlyCMA-1),
derived from high endothelial venules of lymph nodes, is a soluble,
physiological ligand for L-selectin. GlyCAM-1 appears to be a
signaling molecule that interacts with lymphocyte L-selectin to induce
a high avidity state of the integrin, LFA-1. GlyCAM-1 is a mucin-like
glycoprotein with a heterogeneous array of oligosaccharides with 6'
and 6 sulfated sialyl Lewis X typetermini. The polypeptide backbone
of 133 amino acid residues has 10 clusters of contiguous hydroxy-amino
acid residues (dyads, triads or a tretrad), suggesting that a closely
packed ensemble of olgiosaccharides forms the biologically relevant
ligand. We propose to identify the arrays of O-glycans using tandem
mass spectrometry with collision-induced dissociation and Edman
sequencing. Our preliminary studies using HPLC-electrospray
ionization mass spectrometry (LC-ESI/MS) have shown that trypsin
cleaves GlyCAM-1 between the two glycosylated regions. We will
fractionate tryptic digests of GlyCAM-1 using L-selectin affinity
chromatography. The oligosaccharides from each regional glycopeptide
will be released by b-and 6- O-SO3-GlcNAc. The high affinity regional
glycopeptides will be digested with an array of specific endoproteases
to produce glycopeptides containing different combinations of the
Ser/Thr clusters. The digests will be analyzed using LC-ESI/MS with
selective ion monitoring (m/z204) to located the glycosylated
fragments. These smaller glycopeptides will be fractionated by
affinity chromatography using an immunoglobulin/L-selectin chimera.
The oligosaccharides willbe released by b-elimination from the
L-selectin binding glycopeptides. Using matrix assisted laser
desorption ionization (MALDI) with collision induced dissociation
(CID), we will characterize the O-glycans with respect to molecular
weights, composition (in terms of Neu5Ac, Hex,deoxyHex, NexNAc,
Hex-SO3 and HexNAc-SO3), sequence, branching and residue location of
sulfate moieties. Oligosaccharides will be assigned to specific
peptide loci using MALDI-CID. Spectra will be obtained with a tandem
instrument. These last analyses will give i) the peptide sequence
from the mass of the gas-phase de-glycosylated peptide and associated
fragments; ii) the masses of the intact oligosaccharide chains; and
iii) the peptide location of the oligosaccharide chains from the
masses of the glycosylated peptide fragments.
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CORE--PROTEOMICS FACILITY
-
批准号:8361346
-
项目类别:
-
资助金额:$11.87万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
GROUP MEETING IN PROTEOMICS
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批准号:8361476
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项目类别:
-
资助金额:$4.5万
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财政年份:2011
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负责人:ROBERT REID TOWNSEND
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依托单位:
MEETINGS AND CONFERENCES
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批准号:8361477
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项目类别:
-
资助金额:$3.04万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:8168696
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项目类别:
-
资助金额:$15.54万
-
财政年份:2010
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7953906
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项目类别:
-
资助金额:$1.98万
-
财政年份:2009
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
PROTEOMICS CORE
-
批准号:7777677
-
项目类别:
-
资助金额:$9.21万
-
财政年份:2009
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7721464
-
项目类别:
-
资助金额:$1.07万
-
财政年份:2008
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负责人:ROBERT REID TOWNSEND
-
依托单位:
Washington University Center for Translational Neuroscience
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批准号:7321054
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项目类别:
-
资助金额:$23.01万
-
财政年份:2006
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7355276
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项目类别:
-
资助金额:$1.13万
-
财政年份:2006
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: NEUROLOGICAL DISORDERS, OLFACTORY, BEHAVIOR
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批准号:7166295
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项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: BIOINFORMATICS
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批准号:7166298
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: PLANT GENETICS
-
批准号:7166297
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: CANCER
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批准号:7166294
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: HUMAN GENOME
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批准号:7166296
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
Core--Proteomics Facility
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批准号:6998197
-
项目类别:
-
资助金额:$11.64万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE G: PROTEOMICS
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批准号:6827142
-
项目类别:
-
资助金额:$9.2万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
POST TRANSLATIONAL MOD STRUCT OF CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
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批准号:6308867
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
STRUCTURAL ELUCIDATION OF GASTRIC H+, K+ ATPASE
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批准号:6308891
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
ANALYSIS OF O LINKED GLYCOPEPTIDES
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批准号:6308822
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项目类别:
-
资助金额:$0.99万
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财政年份:2000
-
负责人:ROBERT REID TOWNSEND
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依托单位:
GLYCOSYLATION OF APOLIPOPROTEIN C III IN SUBJECTS W/ MYOCARDIAL INFARCTION RISK
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批准号:6308868
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
海外基金