STRUCTURAL ELUCIDATION OF GASTRIC H+, K+ ATPASE
STRUCTURAL ELUCIDATION OF GASTRIC H+, K+ ATPASE
批准号:
6308891
负责人:
ROBERT REID TOWNSEND
金额:
$0.99万
依托单位国家:
美国
项目类别:
财政年份:
2000
资助国家:
美国
项目状态:
已结题
起止时间:
2000-03-01 至 2002-02-28
中文摘要
胃H+,K+-ATPase是一种阳离子逆向转运蛋白,包括
M1=94,000个亚基的a和b亚基,m1=60-80,000,
分别为(1)。克隆的大鼠a亚基由1033个氨基酸组成。
酸(相对分子质量=114,012)和5个潜在的糖基化位点(2),
已被提议不以其糖基化为基础
疑似位于细胞膜的细胞质一侧,
不能与凝集素Sepharose柱结合,以及非特异性
高碘酸化后丹磺酰肼对α-亚基的染色
凝胶条带的处理(3)。我们最近证实,
A-亚基绝对不是糖基化的基础
电印迹条带单糖分析(4)。克隆人
大鼠b亚基由294个氨基酸组成(相对分子质量为33,689),其中7个
潜在的N-糖基化位点(5)。兔b亚基染色
与小麦胚芽结合的十二烷基硫酸钠凝胶上碳水化合物呈阳性
凝集素和蓖麻毒素A琼脂糖柱,改变了流动性
用PNGase处理,发现含有己糖和己糖胺
(3)。我们发现兔的b-亚基含有一定比例的半乳糖
和GlcNAc到人类,这表明存在乳糖胺型
低聚糖(4)。此外,对蛋白质上GalN的检测
在去除所有N-连接的寡糖后,表明存在
O-连接结构。B亚基被发现缺乏
唾液酸,唾液酸基转移酶活性以来的一个值得注意的发现
在胃肠道组织中具有区域特异性(6)。我们建议
扩展这些对该膜结构的初步研究
具有以下特定目的的糖蛋白。(1)确定
B-亚基糖型的精确相对分子质量
基质辅助激光解吸MS(2)定位
用LC/电喷雾MS分析糖基化(3)
阐明低聚糖的结构并最终定义
在每个肽轨迹上进行合奏。由于糖基化作用,b亚基
以涂片形式迁移,经十二烷基硫酸钠-PAGE分析,估计分子量为
60-80 kDa。精确测定个体的分子量
糖型可以估计糖基化的数量。
站点存在,并提供“全球”测量以指导
针对具体目标的额外结构研究的战略2和
3.糖基化的7个潜在N-连接位点的数目
或者,某些蛋白质是否被可变的糖基化还不得而知。
将使用LC/电喷雾MS来确定哪些N-连接位点是
糖基化并定位O-糖基化基因座。我们的第三个
其具体目的是阐明低聚糖的结构。上一首
使用高效液相图谱方法的研究表明,
酶促释放的b亚基上的寡糖不会
与任何常见的乳糖胺或高甘露糖共洗脱
低聚糖。使用HPLC的单寡糖将是
制备了它们,并用MALD-MS测定了它们的分子量。
结构将使用化学和化学相结合的方法来推断
酶促裂解和适当的质谱分析
可在中心购买。1.Forte,J.G.和Lee,H.C.(1977)
胃肠病学,73,921-2。2.Shull,G.E.和Lingrel,J.B.(1986)
J.Biol.化学。261,16788-16791。3.冈本,C.T.,卡皮罗,J.M.
斯莫尔卡,A.和福特,J.G.(1990)Biochim。生物群落。Acta 1037,
360-372。4.WeitzHandler,M.,Kadlecik,D.,Avdalovic,N.,Forte,
J.,Chow,D.和Townsen,R.R.接受J.Biol。化学。(2月/3月)
首页--期刊主要分类--期刊细介绍--期刊题录与文摘--期刊详细文摘内容
J.G.和Levenson,R.(1990)J.Biol.化学。265,19878-19884。6.
J·J·泰杰斯·罗斯·J·韦恩斯坦·J·保尔森(1988)J.
化学。263、6302-6309。
英文摘要
The gastric H+,K+-ATPase is a cation antiporter which consists of
a and b subunits with M1 = 94,000 subunits with M1 = 60-80,000,
respectively (1). The cloned rat a subunit consists of 1033 amino
acids (MW = 114,012) and 5 potential glycosylation sites (2), which
have been proposed not to be glycosylated on the basis of their
suspected location on the cytoplasmic side of the plasma membrane, the
inability to bind to lectin Sepharose columns, and the non-specific
staining of the a-subunit with dansyl hydrazine after periodate
treatment of gel bands (3). We have recently confirmed that the
a-subunit is definitively not glycosylated on the basis of
monosaccharide analysis of the electro-blotted band (4). The cloned
rat b subunit consists of 294 amino acids (MW = 33,689) with 7
potential N-glycosylation sites (5). The rabbit b subunit stained
positively for carbohydrate on SDS gels, bound to wheat germ
agglutinin and Ricin A Sepharose columns, changed mobility after
treatment with PNGase and was found to contain hexose and hexosamines
(3). We found that the b-subunit from rabbit contained a ratio of Gal
and GlcNAc to Man which suggested the presence of lactosamine-type
oligosaccharides (4). Further, the detection of GalN on the protein
after removal of all N-linked oligosaccharides indicated the presence
of O-linked structures. The b subunit was found to be devoid of
sialic acids, a noteworthy finding since sialyl transferase activity
is regio-specific in gastrointestinal tissues (6). We propose to
extend these initial studies on the structure of this membrane
glycoprotein with the following specific aims. (1) Determine the
precise molecular weight of the glycoforms of the b-subunit using
matrix-assisted laser desorption MS. (2) Locate the sites of
glycosylation through analyses using LC/electrospray MS. (3)
Elucidate the oligosaccharide structures and eventually define the
ensemble at each eptide locus. Due to glycosylation, the b subunit
migrates as a smear by SDS PAGE with an estimated molecular weight of
60-80 kDa. Precise molecular weight determination of the individual
glycoforms may enable an estimation of the number of glycosylation
sites which are present and provide "global" measurements to direct
strategies for the additional structural studies in specific aims2 and
3. The number of the 7 potential N-linked sites which are glysoylated
or whether somesites are variably glycosylated is not known.
LC/electrospray MS will be used to ascertain which N-linked sites are
glycosylated and to locate the O-glycosylated loci. Our third
specific aim is to elucidate the oligosaccharide structures. Previous
studies, using an HPLC mapping approach, indicated that the
enzymatically-released oligosaccharides on the b subunit do not
co-elute with any of the commonly found lactosamine or high-mannose
oligosaccharides. Using HPLCsingular oligosaccharides will be
prepared and their molecular weight determined using MALD-MS.
Structures will be deduced using a combination of chemical and
enzymatic cleavages and appropriate mass spectrometric analyses
available at the Center. 1. Forte, J.G. and Lee, H.C. (1977)
Gastroenterology, 73, 921-2. 2. Shull, G.E. and Lingrel, J.B. (1986)
J. Biol. Chem. 261, 16788-16791. 3. Okamoto, C.T., Karpilow, J.M.,
Smolka, A. and Forte, J.G. (1990) Biochim. Biophys. Acta 1037,
360-372. 4. Weitzhandler, M., Kadlecik, D., Avdalovic, N., Forte,
J., Chow, D. and Townsend, R.R. accepted J. Biol. Chem. (Feb/Mar) 5.
Canfield, V.A., Okamoto, C.T., Chow, D., Dortman, J., Gros, P., Forte,
J.G. and Levenson, R. (1990) J. Biol. Chem. 265, 19878-19884. 6.
Taatjes, D.J., Roth, J., Weinstein, J., Paulson, J.C. (1988) J. Biol.
Chem. 263, 6302-6309.
期刊论文(0)
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会议论文
CORE--PROTEOMICS FACILITY
-
批准号:8361346
-
项目类别:
-
资助金额:$11.87万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
GROUP MEETING IN PROTEOMICS
-
批准号:8361476
-
项目类别:
-
资助金额:$4.5万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
MEETINGS AND CONFERENCES
-
批准号:8361477
-
项目类别:
-
资助金额:$3.04万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:8168696
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项目类别:
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资助金额:$15.54万
-
财政年份:2010
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负责人:ROBERT REID TOWNSEND
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依托单位:
CORE--PROTEOMICS FACILITY
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批准号:7953906
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项目类别:
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资助金额:$1.98万
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财政年份:2009
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负责人:ROBERT REID TOWNSEND
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依托单位:
PROTEOMICS CORE
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批准号:7777677
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项目类别:
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资助金额:$9.21万
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财政年份:2009
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负责人:ROBERT REID TOWNSEND
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依托单位:
CORE--PROTEOMICS FACILITY
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批准号:7721464
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资助金额:$1.07万
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财政年份:2008
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负责人:ROBERT REID TOWNSEND
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依托单位:
Washington University Center for Translational Neuroscience
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批准号:7321054
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资助金额:$23.01万
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财政年份:2006
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负责人:ROBERT REID TOWNSEND
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依托单位:
CORE--PROTEOMICS FACILITY
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批准号:7355276
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项目类别:
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资助金额:$1.13万
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财政年份:2006
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负责人:ROBERT REID TOWNSEND
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依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: NEUROLOGICAL DISORDERS, OLFACTORY, BEHAVIOR
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批准号:7166295
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项目类别:
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资助金额:$39.71万
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财政年份:2005
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负责人:ROBERT REID TOWNSEND
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依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: BIOINFORMATICS
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批准号:7166298
-
项目类别:
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资助金额:$39.71万
-
财政年份:2005
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负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: PLANT GENETICS
-
批准号:7166297
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: CANCER
-
批准号:7166294
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: HUMAN GENOME
-
批准号:7166296
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
Core--Proteomics Facility
-
批准号:6998197
-
项目类别:
-
资助金额:$11.64万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE G: PROTEOMICS
-
批准号:6827142
-
项目类别:
-
资助金额:$9.2万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
POST TRANSLATIONAL MOD STRUCT OF CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
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批准号:6308867
-
项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
STRUCTURAL CHARACTERIZATION OF HIGH AFFINITY GLYCOPEPTIDES OF GLYCAM 1
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批准号:6308830
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
ANALYSIS OF O LINKED GLYCOPEPTIDES
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批准号:6308822
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
GLYCOSYLATION OF APOLIPOPROTEIN C III IN SUBJECTS W/ MYOCARDIAL INFARCTION RISK
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批准号:6308868
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
海外基金