STRUCTURAL ELUCIDATION OF GASTRIC H+, K+ ATPASE
STRUCTURAL ELUCIDATION OF GASTRIC H+, K+ ATPASE
批准号:
6308891
负责人:
ROBERT REID TOWNSEND
金额:
$0.99万
依托单位国家:
美国
项目类别:
财政年份:
2000
资助国家:
美国
项目状态:
已结题
起止时间:
2000-03-01 至 2002-02-28
中文摘要
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英文摘要
The gastric H+,K+-ATPase is a cation antiporter which consists of
a and b subunits with M1 = 94,000 subunits with M1 = 60-80,000,
respectively (1). The cloned rat a subunit consists of 1033 amino
acids (MW = 114,012) and 5 potential glycosylation sites (2), which
have been proposed not to be glycosylated on the basis of their
suspected location on the cytoplasmic side of the plasma membrane, the
inability to bind to lectin Sepharose columns, and the non-specific
staining of the a-subunit with dansyl hydrazine after periodate
treatment of gel bands (3). We have recently confirmed that the
a-subunit is definitively not glycosylated on the basis of
monosaccharide analysis of the electro-blotted band (4). The cloned
rat b subunit consists of 294 amino acids (MW = 33,689) with 7
potential N-glycosylation sites (5). The rabbit b subunit stained
positively for carbohydrate on SDS gels, bound to wheat germ
agglutinin and Ricin A Sepharose columns, changed mobility after
treatment with PNGase and was found to contain hexose and hexosamines
(3). We found that the b-subunit from rabbit contained a ratio of Gal
and GlcNAc to Man which suggested the presence of lactosamine-type
oligosaccharides (4). Further, the detection of GalN on the protein
after removal of all N-linked oligosaccharides indicated the presence
of O-linked structures. The b subunit was found to be devoid of
sialic acids, a noteworthy finding since sialyl transferase activity
is regio-specific in gastrointestinal tissues (6). We propose to
extend these initial studies on the structure of this membrane
glycoprotein with the following specific aims. (1) Determine the
precise molecular weight of the glycoforms of the b-subunit using
matrix-assisted laser desorption MS. (2) Locate the sites of
glycosylation through analyses using LC/electrospray MS. (3)
Elucidate the oligosaccharide structures and eventually define the
ensemble at each eptide locus. Due to glycosylation, the b subunit
migrates as a smear by SDS PAGE with an estimated molecular weight of
60-80 kDa. Precise molecular weight determination of the individual
glycoforms may enable an estimation of the number of glycosylation
sites which are present and provide "global" measurements to direct
strategies for the additional structural studies in specific aims2 and
3. The number of the 7 potential N-linked sites which are glysoylated
or whether somesites are variably glycosylated is not known.
LC/electrospray MS will be used to ascertain which N-linked sites are
glycosylated and to locate the O-glycosylated loci. Our third
specific aim is to elucidate the oligosaccharide structures. Previous
studies, using an HPLC mapping approach, indicated that the
enzymatically-released oligosaccharides on the b subunit do not
co-elute with any of the commonly found lactosamine or high-mannose
oligosaccharides. Using HPLCsingular oligosaccharides will be
prepared and their molecular weight determined using MALD-MS.
Structures will be deduced using a combination of chemical and
enzymatic cleavages and appropriate mass spectrometric analyses
available at the Center. 1. Forte, J.G. and Lee, H.C. (1977)
Gastroenterology, 73, 921-2. 2. Shull, G.E. and Lingrel, J.B. (1986)
J. Biol. Chem. 261, 16788-16791. 3. Okamoto, C.T., Karpilow, J.M.,
Smolka, A. and Forte, J.G. (1990) Biochim. Biophys. Acta 1037,
360-372. 4. Weitzhandler, M., Kadlecik, D., Avdalovic, N., Forte,
J., Chow, D. and Townsend, R.R. accepted J. Biol. Chem. (Feb/Mar) 5.
Canfield, V.A., Okamoto, C.T., Chow, D., Dortman, J., Gros, P., Forte,
J.G. and Levenson, R. (1990) J. Biol. Chem. 265, 19878-19884. 6.
Taatjes, D.J., Roth, J., Weinstein, J., Paulson, J.C. (1988) J. Biol.
Chem. 263, 6302-6309.
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会议论文
CORE--PROTEOMICS FACILITY
-
批准号:8361346
-
项目类别:
-
资助金额:$11.87万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
GROUP MEETING IN PROTEOMICS
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批准号:8361476
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项目类别:
-
资助金额:$4.5万
-
财政年份:2011
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负责人:ROBERT REID TOWNSEND
-
依托单位:
MEETINGS AND CONFERENCES
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批准号:8361477
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项目类别:
-
资助金额:$3.04万
-
财政年份:2011
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:8168696
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项目类别:
-
资助金额:$15.54万
-
财政年份:2010
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7953906
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项目类别:
-
资助金额:$1.98万
-
财政年份:2009
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
PROTEOMICS CORE
-
批准号:7777677
-
项目类别:
-
资助金额:$9.21万
-
财政年份:2009
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7721464
-
项目类别:
-
资助金额:$1.07万
-
财政年份:2008
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
Washington University Center for Translational Neuroscience
-
批准号:7321054
-
项目类别:
-
资助金额:$23.01万
-
财政年份:2006
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE--PROTEOMICS FACILITY
-
批准号:7355276
-
项目类别:
-
资助金额:$1.13万
-
财政年份:2006
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: NEUROLOGICAL DISORDERS, OLFACTORY, BEHAVIOR
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批准号:7166295
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: BIOINFORMATICS
-
批准号:7166298
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: PLANT GENETICS
-
批准号:7166297
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: CANCER
-
批准号:7166294
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
HIGH PERFORMANCE COMPUTING CLUSTER: HUMAN GENOME
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批准号:7166296
-
项目类别:
-
资助金额:$39.71万
-
财政年份:2005
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
Core--Proteomics Facility
-
批准号:6998197
-
项目类别:
-
资助金额:$11.64万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
CORE G: PROTEOMICS
-
批准号:6827142
-
项目类别:
-
资助金额:$9.2万
-
财政年份:2004
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
POST TRANSLATIONAL MOD STRUCT OF CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REG
-
批准号:6308867
-
项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
STRUCTURAL CHARACTERIZATION OF HIGH AFFINITY GLYCOPEPTIDES OF GLYCAM 1
-
批准号:6308830
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
ANALYSIS OF O LINKED GLYCOPEPTIDES
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批准号:6308822
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
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依托单位:
GLYCOSYLATION OF APOLIPOPROTEIN C III IN SUBJECTS W/ MYOCARDIAL INFARCTION RISK
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批准号:6308868
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项目类别:
-
资助金额:$0.99万
-
财政年份:2000
-
负责人:ROBERT REID TOWNSEND
-
依托单位:
海外基金