Node-Pore Sensing for Cellular Screening

用于细胞筛查的节点孔传感

• 批准号: 8893816
• 负责人: Michael Lustig
• 金额: $ 22.44万
• 依托单位: UNIVERSITY OF CALIFORNIA BERKELEY
• 依托单位国家: 美国
• 财政年份: 2015
• 资助国家: 美国
• 起止时间: 2015-04-01 至 2017-01-31
• 项目状态: 已结题
• 来源: https://reporter.nih.gov/project-details/8893816
• 关键词: Antibodies; Biological Sciences; Biomedical Research; Bone Marrow; Breast Cancer cell line; CD44 gene; Cell Separation; Cell Surface Receptors; Cell surface; Cells; Classification; Clinical; Code; Color; Detection; Development; Devices; Diagnosis; Diagnostic; Disease; Disease remission; Endothelial Cells; Epidermal Growth Factor Receptor; Flow Cytometry; Fluorochrome; Gene Expression; Goals; Health; Hematologic Neoplasms; Label; MCF10A cells; MCF7 cell; MDA MB 231; Malignant Neoplasms; Measures; Metastatic breast cancer; Methods; Microfluidics; Molecular; Monitor; Mucin-1 Staining Method; Neoplasm Circulating Cells; Noise; Patients; Population; Process; Radar; Research; Residual Neoplasm; Resolution; Scientist; Signal Transduction; Solid Neoplasm; Sorting - Cell Movement; Surface; System; TACSTD2 gene; Techniques; Technology; Telecommunications; Time; base; cancer cell; cell population study; clinical Diagnosis; clinical application; cost; design; high reward; high risk; high throughput screening; improved; innovation; mechanical pressure; novel; peripheral blood; point of care; point-of-care diagnostics; regenerative; research study; screening; stem cell differentiation; stem cell population; theories

DESCRIPTION: The overarching goal of this project is to develop Node-Pore Sensing (NPS), an innovative label-free microfluidic technique, such that it could go beyond flow cytometry in terms of number of markers that can be practically and routinely screened simultaneously and in a non-destructive manner. Currently, flow cytometry is practically limited to 6-10 markers due to spectral emission overlap of the different fluorochromes used simultaneously. NPS measures the transit time of a cell as it interacts (specifically or non-specifically) with antibodies functionalized in a microfluidic channel that has been segmented by nodes. Specific interactions between cell-surface receptors and the functionalized antibody retard the cell, leading to longer transit times and subsequent determination of a particular surface-marker presence. This high-risk, high-reward R21 project has two Specific Aims: • Aim 1: To optimize device coding and processing for high throughput screening and real-time analysis. We will design and develop a unique NPS platform based on Barker codes that enable high- resolution detection even with low signal-to-noise ratios (SNRs). Barker codes are binary signals that are often used in radar and telecommunications to which NPS is analogous. • Aim 2: To incorporate sorting technology onto the NPS platform developed in Aim 1. We intend to realize the full potential of NPS and integrate a sorting technology to the NPS platform. The sorting technology will be based on mechanical pressure actuation to sort cells rapidly into phenotypic sub- populations for downstream analysis and/or culture. NPS development and proof-of-principle will be based on screening and sorting breast-cancer cell lines, MCF10A, MCF-7, MDA-MB-436, and MDA-MB-231-all of which have different malignancy and metastatic status-for markers EpCAM, CD44, CD24, CD29, CD49f, CD133, Axl, MUC1, EGFR, and ErbB2. By focusing on these markers, we would have an immediate impact in studies involving characterizing sub-populations of circulating tumor cells from patients with metastatic breast cancer. Thus, our proof-of-principle for a fully developed NPS has high impact. The proposed integrated multi-marker NPS and sorting technology proposed has potential for transformative impact in a number of fields ranging from fundamental life sciences research to point-of-care diagnostics. For example, flow cytometry is the cornerstone to diagnosis for many of the hematologic malignancies. With our screening/sorting technique, we could detect minimal residual disease and remission states. Beyond clinical diagnosis, our technology could be employed to characterize, for instance, changes in surface-marker expression during stem-cell differentiation in order to identify and isolate potentially important and rare sub-populations.

描述：该项目的总体目标是开发节点孔传感（NPS），这是一种创新的无标签微流控技术，因此它可以超越流式细胞术，在标记物数量方面可以同时进行实际和常规筛选，并且以非破坏性的方式进行。目前，由于同时使用的不同荧光染料的光谱发射重叠，流式细胞术实际上仅限于6-10个标记物。NPS测量细胞与被节点分割的微流控通道中功能化的抗体相互作用（特异性或非特异性）时的传递时间。细胞表面受体和功能化抗体之间的特异性相互作用延缓了细胞，导致更长的运输时间和随后对特定表面标记存在的确定。这个高风险、高回报的R21项目有两个具体目标：