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A community resource for wheat functional genomics

A community resource for wheat functional genomics
小麦功能基因组学社区资源
批准号:
BB/F010370/1
负责人:
Keith Edwards
金额:
$47.27万
依托单位:
依托单位国家:
英国
项目类别:
Research Grant
财政年份:
2008
资助国家:
英国
项目状态:
已结题
起止时间:
2008 至 --

项目摘要

项目成果

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中文摘要
翻译
英国的小麦研究资源目前是孤立的,并根据内部需求量身定做。因此,它们往往是外部世界看不见或无法接触到的。在小麦社区、Mongraph(由Rothamsted、Iger、JIC和SCRI组成)、小麦遗传改良网络(WGIN)和小谷物网络(SGCN)的支持下,我们建议启动一个过程,将这些资源集中在一个保护伞下,即现有的SGCN及其相关网站。我们的方法将组织英国的小麦工具和资源,使所有人都可以访问它们,同时采用“客户至上”的方法,即新SGCN网站的用户需要执行单一搜索,而不考虑资源的物理位置。根据申请的资源,布里斯托尔小组将监督通过SGCN网站提供现有生物/生物信息学资源和若干新资源的过程。这一过程将形成SGCN网站的初始资源“模块”,随着时间的推移,将鼓励社区的其他成员根据BBSRC最近推出的数据共享政策添加到这些模块中。考虑到所有植物科学家面临的全球挑战,我们认为这项提议代表着英国小麦社区作为一个一体化社区团结一致、面向未来的最佳机会。
英文摘要
UK-based resources for wheat research are currently isolated and tailored to 'in-house' needs. As such they are often invisible to or inaccessible by the outside world. With the backing of the wheat community, Monogram (consisting of Rothamsted, IGER, JIC and SCRI), the Wheat Genetic Improvement Network (WGIN) and the Small Grain Cereal Network (SGCN), we propose to initiate a process which brings together these resources under one umbrella namely the existing SGCN and its associated web site. Our approach will organise the UK's wheat tools and resources such that they become accessible to all, while having a 'customer first' approach whereby users of the new SGCN site need to perform single searches regardless of the resources' physical location. With the resources requested the Bristol group will oversee the process whereby both its current biological/bioinformatics' resources and several new resources become available via the SGCN web site. This process will form the initial resource 'modules' of the SGCN web site to which other members of the community will be encouraged to add to over time in line with BBSRC's recently launched data sharing policy. Given the global challenges facing all plant scientists we believe that this proposal represents the best opportunity yet for the UK wheat community to work as one and face the future as an integrated community.
期刊论文(7)
专著(0)
科研奖励(0)
会议论文
CerealsDB 3.0: expansion of resources and data integration.
CEATEALSDB 3.0:资源和数据集成的扩展。
DOI: 10.1186/s12859-016-1139-x
发表时间: 2016-06-24
期刊: BMC bioinformatics
影响因子: 3
作者: [Wilkinson PA, Winfield MO, Barker GL, Tyrrell S, Bian X, Allen AM, Burridge A, Coghill JA, Waterfall C, Caccamo M, Davey RP, Edwards KJ]
通讯作者: Edwards KJ
Additional file 1: of CerealsDB 3.0: expansion of resources and data integration
CerealsDB 3.0附加文件1:资源扩展与数据整合
DOI: 10.6084/m9.figshare.c.3644624_d1
发表时间: 2016
期刊:
影响因子: --
作者: [Wilkinson P]
通讯作者: Wilkinson P
DOI: 10.1111/pbi.12183
发表时间: 2014-08
期刊: Plant biotechnology journal
影响因子: 13.8
作者: [Wang S, Wong D, Forrest K, Allen A, Chao S, Huang BE, Maccaferri M, Salvi S, Milner SG, Cattivelli L, Mastrangelo AM, Whan A, Stephen S, Barker G, Wieseke R, Plieske J, International Wheat Genome Sequencing Consortium, Lillemo M, Mather D, Appels R, Dolferus R, Brown-Guedira G, Korol A, Akhunova AR, Feuillet C, Salse J, Morgante M, Pozniak C, Luo MC, Dvorak J, Morell M, Dubcovsky J, Ganal M, Tuberosa R, Lawley C, Mikoulitch I, Cavanagh C, Edwards KJ, Hayden M, Akhunov E]
通讯作者: Akhunov E
DOI: 10.1186/1471-2105-13-219
发表时间: 2012-09-03
期刊: BMC bioinformatics
影响因子: 3
作者: [Wilkinson PA, Winfield MO, Barker GL, Allen AM, Burridge A, Coghill JA, Edwards KJ]
通讯作者: Edwards KJ
共 6 条
    A pipeline for efficient recombination in wheat
    • 批准号:
      BB/W003317/1
    • 项目类别:
      Research Grant
    • 资助金额:
      $25.53万
    • 财政年份:
      2021
    • 负责人:
      Keith Edwards
    • 依托单位:
    Australia Partnering Award: Are wheat introgressions the breeders' friend or foe?
    • 批准号:
      BB/T018364/1
    • 项目类别:
      Research Grant
    • 资助金额:
      $5.18万
    • 财政年份:
      2020
    • 负责人:
      Keith Edwards
    • 依托单位:
    A multi-channel liquid handler for the Bristol Genomics facility
    • 批准号:
      BB/S019219/1
    • 项目类别:
      Research Grant
    • 资助金额:
      $22.83万
    • 财政年份:
      2019
    • 负责人:
      Keith Edwards
    • 依托单位:
    Multi-national workshop on cereal recombination
    • 批准号:
      BB/S020519/1
    • 项目类别:
      Research Grant
    • 资助金额:
      $1.26万
    • 财政年份:
      2019
    • 负责人:
      Keith Edwards
    • 依托单位:
    国内基金
    海外基金
    协同中继系统跨层资源分配与优化调度的理论及方法
    • 批准号:
      60972070
    • 项目类别:
      面上项目
    • 资助金额:
      33.0万元
    • 批准年份:
      2009
    • 负责人:
      陈前斌
    • 依托单位:
    横断山区淡水三肠目涡虫资源及分类学研究
    • 批准号:
      30670247
    • 项目类别:
      面上项目
    • 资助金额:
      27.0万元
    • 批准年份:
      2006
    • 负责人:
      陈广文
    • 依托单位: