FT IR SPECTROMETRIC ANALYSIS OF CARBOHYDRATE COMPOSITION
FT IR SPECTROMETRIC ANALYSIS OF CARBOHYDRATE COMPOSITION
批准号:
6653540
负责人:
ROBERTA K MERKLE
金额:
$28.8万
依托单位:
依托单位国家:
美国
项目类别:
财政年份:
2002
资助国家:
美国
项目状态:
已结题
起止时间:
2002-08-01 至 2003-07-31
中文摘要
点击翻译按钮获取中文摘要
英文摘要
This project studies the interaction between galectin-1, a soluble
galactose-binding lectin, and a variety of
N-acetyllactosamine-containing oligosaccharides. A modified form of
Chinese hamster ovary (CHO) cell galectin-1 has been generated and
expressed in large quantities in E. coli. The initial goal was to
attempt to assign all of the 1H resonances of the protein and to
obtain binding constants for the ligands from a study of chemical
shift and line width changes. Inter-proton distance information
obtained from nuclear Overhauser effect (NOE) measurements will be
used to try to identify contact areas between galectin-1 and its
ligand. Another goal of this project is to generate isotope-enriched
forms of the lectin for detailed NMR studies. To date, approximately
10 mg of [15N]-galectin-1 and 10 mg of [13C,15N]-doubly labeled
galectin-1 have been isolated, and 1H-15N correlated spectra have been
obtained to test the feasibility of using this sample to assign the 1H
and 15N resonances. With the successful preparation of
[13C,15N]-doubly isotope-labeled galectin-1, work began on optimizing
3D triple-resonance experiments for proton, carbon, and nitrogen
assignments. Due to the high molecular weight of the homodimer,
versions of the standard experiments (e.g., HNCO, HNCA, CBCACONH,
HNCACB) were adopted that minimize signal loss due to relaxation. In
addition, the buffer conditions were varied in order to promote
solubilization and reduce aggregation. An alternate form of the
galectin-1 protein has also been obtained by generating a mutant
galectin-1 protein that at high concentrations forms an active
monomer. Since NMR protein structure studies require protein
concentrations in the millimolar range, we have generated mutations in
order to form a monomer that is stable at high concentrations. The
isolated monomer lectin was found to be both inactive and abnormally
folded. The lectin did not agglutinate erythrocytes, it bound very
poorly to immobilized asialofetuin, and it did not compete with
agglutination by the dimeric C2S lectin. In addition, the protein
displayed an altered circular dichroism spectrum indicating that the
protein was assuming an alternate folding pattern. These data
indicate that the nature of the truncation mutations that were
introduced into the molecule were too severe to maintain folding of
the binding domain of the monomeric lectin. Polylactosamine ligands
for the lectin have been generated, including the complete series of
lacto-N-neotetraose and lactosamine oligomers with up to eight sugars.
NMR techniques applied to the galectin-oligosaccharide mixtures
include line width analysis, magnetization transfer, and transferred
NOE studies. For the ligands analyzed so far, the data are compatible
with predominant binding to the terminal lactosamine unit. When no
terminal galactosyl is available, the oligosaccharide slides into the
binding groove such that a galactosyl residue can occupy the main
binding site. It is not yet known how far into the binding groove
longer oligosaccharides may extend. Differentiation between identical
residues and determination of the location on the polylactosamine
chain where interactions are occurring requires specific labeling of
targeted residues. This work was begun by synthesizing a
tetra-N-acetyllactosamine containing a terminal [1-13C]-galactosyl
residue. The next synthetic step is to extend the length of the
polylactosamine structure and generate a series of oligosaccharides,
each with a uniquely labeled galactosyl residue at each position
within the polylactosamine chain. We can then confirm whether the
galectin always prefers the terminal residues when presented with a
longer repeating poly-N-acetyllactosamine. A paper has been submitted
for publication.
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会议论文
GLYCOSYL COMPOSITION ANALYSIS OF MANDUCA SEXTA CHITINASE
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批准号:6653603
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
-
负责人:ROBERTA K MERKLE
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依托单位:
COURSES IN SEPARATION & CHARACTERIZATION OF COMPLEX CARBOHYDRATES
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批准号:6653606
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
-
负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF GLYCOPROTEIN SAMPLES
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批准号:6653593
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
-
负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL LINKAGE ANALYSIS OF ENZYMATICALLY SYNTHESIZED GLUCANS
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批准号:6653598
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF COLLAGEN SAMPLES
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批准号:6653591
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF SACCHARIDE
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批准号:6653596
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
-
负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF STREPTOCOCCUS SUIS
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批准号:6653590
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项目类别:
-
资助金额:$28.8万
-
财政年份:2002
-
负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION ANALYSIS
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批准号:6653594
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项目类别:
-
资助金额:$28.8万
-
财政年份:2002
-
负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF GLYCOPROTEINS
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批准号:6653600
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL LINKAGE ANALYSIS OF WATER SOLUBLE & INSOLUBLE LINKED GLUCANS
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批准号:6653599
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
N LINKED OLIGOSACCHARIDE PROFILING
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批准号:6653592
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF YEAST CELL WALL MATERIAL
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批准号:6653601
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项目类别:
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资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION & LINKAGE ANALYSES OF SACCHARIDES
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批准号:6653595
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF LIPOPOLYSACCHARIDES FROM PREVOTELLA INTERMEDIA
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批准号:6653604
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
CHARACTERIZATION OF OLIGOSACCHARIDES INVOLVED IN NEUROCAN FUNCTION
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批准号:6653571
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
-
负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF STREPTOCOCCUS SUIS
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批准号:6653589
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
COMPOSITION ANALYSIS OF AN ENZYME
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批准号:6653605
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL COMPOSITION & LINKAGE ANALYSES
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批准号:6653602
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项目类别:
-
资助金额:$28.8万
-
财政年份:2002
-
负责人:ROBERTA K MERKLE
-
依托单位:
GLYCOSYL LINKAGE ANALYSIS OF WATER SOLUBLE & INSOLUBLE LINKED GLUCANS
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批准号:6653597
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
GLYCOSYL COMPOSITION ANALYSIS OF LIPOPROTEINS
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批准号:6653587
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项目类别:
-
资助金额:$28.8万
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财政年份:2002
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负责人:ROBERTA K MERKLE
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依托单位:
海外基金